Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 SETP21-201ENST00000514799 892 ntBASIC5.84□□□□□ -1.47
C9orf72Q96LT7 AC139697.1-201ENST00000548429 745 ntBASIC5.84□□□□□ -1.47
C9orf72Q96LT7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 NANOGP3-201ENST00000605855 286 ntBASIC5.84□□□□□ -1.47
C9orf72Q96LT7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf72Q96LT7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.84□□□□□ -1.48
C9orf72Q96LT7 AC068870.1-201ENST00000563737 2455 ntBASIC5.84□□□□□ -1.48
C9orf72Q96LT7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
C9orf72Q96LT7 AC091305.2-201ENST00000624049 1576 ntBASIC5.84□□□□□ -1.48
C9orf72Q96LT7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
C9orf72Q96LT7 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.84□□□□□ -1.48
C9orf72Q96LT7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
C9orf72Q96LT7 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
C9orf72Q96LT7 AP001029.2-203ENST00000589795 4910 ntBASIC5.84□□□□□ -1.48
C9orf72Q96LT7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 NR1H5P-201ENST00000452683 1377 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC117409.1-201ENST00000470499 1310 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AL031985.1-201ENST00000392713 418 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC017078.1-201ENST00000416146 368 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC104843.2-201ENST00000427666 297 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 DEFA9P-201ENST00000433042 285 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 GAPDHP75-201ENST00000433910 943 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 NDUFS5P5-201ENST00000437256 321 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC011476.1-201ENST00000466725 307 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC007998.1-201ENST00000474156 672 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC012123.2-201ENST00000485809 248 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 RPS17P5-201ENST00000498293 408 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC104109.1-201ENST00000498563 436 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 PSMA2P2-201ENST00000504319 686 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC114781.3-201ENST00000512083 142 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC022826.1-201ENST00000519383 805 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 WBP1LP3-201ENST00000523033 208 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC091078.2-201ENST00000557145 559 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC092121.1-201ENST00000569452 202 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 DHFRP1-201ENST00000579682 559 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 MIR6862-1-201ENST00000613016 70 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 MIR6862-2-201ENST00000614755 70 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AL512356.3-201ENST00000623005 461 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC120036.2-201ENST00000509729 1474 ntBASIC5.83□□□□□ -1.48
C9orf72Q96LT7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf72Q96LT7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 HSPD1P7-201ENST00000447985 1686 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AL132656.3-201ENST00000606384 1595 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 MIR130A-201ENST00000385274 89 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AC005042.1-201ENST00000393397 800 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 MIR1203-201ENST00000408812 85 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AL133482.1-201ENST00000415988 498 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 BX284632.2-201ENST00000421091 399 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AL035660.1-201ENST00000422041 222 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 TUBB4BP6-201ENST00000437576 479 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms