Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 GNG5P2-201ENST00000372054 207 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 RN7SKP166-201ENST00000410812 305 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 MTND4P24-201ENST00000424002 397 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AL731534.1-201ENST00000434711 269 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AL158053.1-201ENST00000441503 453 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 CST12P-201ENST00000457644 362 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 SNRPCP3-201ENST00000474888 476 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC016550.1-201ENST00000505348 785 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 TPM3P3-201ENST00000521343 354 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC068305.2-201ENST00000550567 1205 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AL049779.3-201ENST00000557141 606 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC079148.1-201ENST00000565944 819 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AP001496.3-201ENST00000580230 913 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC008507.3-201ENST00000585753 472 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC067773.1-201ENST00000603284 1094 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AP001823.1-201ENST00000604056 1003 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AL450270.1-201ENST00000606160 391 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC027279.1-201ENST00000568885 4284 ntBASIC7.21□□□□□ -1.25
CHMP4CQ96CF2 AC011416.1-201ENST00000514947 1732 ntBASIC7.21□□□□□ -1.25
CHMP4CQ96CF2 AL355834.1-201ENST00000556602 3965 ntBASIC7.21□□□□□ -1.25
CHMP4CQ96CF2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CHMP4CQ96CF2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
CHMP4CQ96CF2 AC005261.2-201ENST00000593427 4258 ntBASIC7.21□□□□□ -1.25
CHMP4CQ96CF2 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 NAMPTP1-201ENST00000440465 2514 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 RN7SKP275-201ENST00000364626 301 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 RNA5SP156-201ENST00000410250 110 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC013410.2-201ENST00000422627 201 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 SEC63P1-201ENST00000425785 1258 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 MTCO1P51-201ENST00000427672 1060 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AL389925.1-201ENST00000432257 728 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC007000.2-201ENST00000442564 487 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 RPL6P30-201ENST00000443382 862 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 MTND6P5-201ENST00000448266 512 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC015908.1-201ENST00000478739 476 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 OR9N1P-202ENST00000494289 481 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC008945.1-201ENST00000505144 499 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 SNORA81.2-201ENST00000516868 170 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 DNAJC19P3-201ENST00000594491 331 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC125494.2-201ENST00000602431 657 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC141002.1-201ENST00000607025 279 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AL445493.3-201ENST00000619568 477 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC069234.4-201ENST00000621276 412 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC016583.1-201ENST00000624221 2431 ntBASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms