Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC010435.1-201ENST00000623353 1177 ntBASIC8.64□□□□□ -1.03
CFAP43Q8NDM7 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.64□□□□□ -1.03
CFAP43Q8NDM7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.64□□□□□ -1.03
CFAP43Q8NDM7 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CFAP43Q8NDM7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC8.64□□□□□ -1.03
CFAP43Q8NDM7 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CFAP43Q8NDM7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CFAP43Q8NDM7 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CFAP43Q8NDM7 AL589993.1-201ENST00000407450 2524 ntBASIC8.64□□□□□ -1.03
CFAP43Q8NDM7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CFAP43Q8NDM7 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 RNU1-149P-201ENST00000390870 161 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AL590139.1-201ENST00000416267 400 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 HNRNPA3P4-201ENST00000427514 803 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 TPT1P13-201ENST00000449760 499 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 RPS29P33-201ENST00000456717 146 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 RPL5P22-201ENST00000480199 884 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AC137627.1-201ENST00000545761 289 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AC087283.1-201ENST00000604029 1074 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AC008745.1-201ENST00000604064 271 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AL133406.3-201ENST00000606817 541 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AL133481.2-203ENST00000607558 139 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AC090607.5-201ENST00000615692 224 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 HSPA8P14-201ENST00000552265 1805 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AC011493.1-201ENST00000596753 1632 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 CASC19-281ENST00000642118 1554 ntBASIC8.63□□□□□ -1.03
CFAP43Q8NDM7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 SNORA17.1-201ENST00000362945 126 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 RNU1-43P-201ENST00000365052 165 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 DBIP1-201ENST00000401435 260 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AL049745.1-201ENST00000433953 286 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AC105399.1-202ENST00000447303 205 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AC008897.1-201ENST00000494006 347 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 snoU109.5-201ENST00000516231 132 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AP000769.2-201ENST00000602344 396 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 MIR192-201ENST00000384915 110 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AL672138.1-201ENST00000450604 1015 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 PDCL3P4-201ENST00000489621 720 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 AC127381.1-201ENST00000555979 939 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 MIR3934-201ENST00000579806 107 ntBASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CFAP43Q8NDM7 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 EPS15P1-202ENST00000459691 2071 ntBASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 RN7SKP113-201ENST00000363891 295 ntBASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms