Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC147055.1-201ENST00000509261 750 ntBASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 AC139365.2-201ENST00000517972 253 ntBASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 KCTD9P4-201ENST00000526766 1166 ntBASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 HNRNPRP2-201ENST00000528421 743 ntBASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 AC024940.4-201ENST00000605507 246 ntBASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 PPATP2-201ENST00000605635 508 ntBASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 AL513548.1-201ENST00000562904 1724 ntBASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 BRD7P6-201ENST00000431406 1860 ntBASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 IMMTP1-201ENST00000435590 2219 ntBASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 AC005618.1-201ENST00000606901 3148 ntBASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD4Q5XG99 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC022905.1-201ENST00000503430 3048 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 MIR585-201ENST00000384887 94 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 RNU1-88P-201ENST00000459274 128 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC026254.2-201ENST00000475295 371 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC090638.1-201ENST00000498296 909 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC021146.10-201ENST00000515628 706 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC073581.1-201ENST00000519036 575 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC130364.2-201ENST00000528639 604 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC138473.1-201ENST00000605717 526 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC090607.5-201ENST00000615692 224 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC136428.4-201ENST00000634254 1155 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 OR52B5P-204ENST00000641744 3467 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AL929601.4-201ENST00000613011 1341 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 ICE2P1-201ENST00000512800 1849 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 MAPK10-323ENST00000641493 3207 ntBASIC5.69□□□□□ -1.5
LYSMD4Q5XG99 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 RN7SKP28-201ENST00000364770 305 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms