Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC016839.1-201ENST00000578162 867 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 MIR3157-201ENST00000578688 85 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 SNX6P1-201ENST00000601728 1224 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 HTR1DP1-201ENST00000616500 888 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 AL645927.2-201ENST00000618350 349 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 AL122023.1-201ENST00000622847 530 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC007603.3-201ENST00000636915 979 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AL022311.1-201ENST00000623726 19416 ntBASIC6.28□□□□□ -1.4
CCDC38Q502W7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC38Q502W7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC38Q502W7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC38Q502W7 LINC02019-201ENST00000608605 2060 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 PARP4P2-201ENST00000446672 3326 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 AC022325.1-201ENST00000502748 2199 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC38Q502W7 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 RPL26P37-201ENST00000411983 438 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 AL121882.1-201ENST00000422893 417 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 BX276092.6-201ENST00000430476 250 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 SOCS5P1-201ENST00000440415 949 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 AC069277.2-201ENST00000454211 432 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 BX276092.8-201ENST00000455722 250 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 RPL12P31-201ENST00000478433 450 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC38Q502W7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 NPM1P42-201ENST00000560329 862 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 AC079148.1-201ENST00000565944 819 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 SNORA74.4-201ENST00000607595 199 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 AL137067.2-201ENST00000621202 131 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 MIR6823-201ENST00000622118 61 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 AC109446.4-201ENST00000623235 2755 ntBASIC6.27□□□□□ -1.41
CCDC38Q502W7 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC38Q502W7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC38Q502W7 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC38Q502W7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC38Q502W7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC38Q502W7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC38Q502W7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC38Q502W7 PROS2P-201ENST00000474651 1951 ntBASIC6.26□□□□□ -1.41
CCDC38Q502W7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC38Q502W7 SPATA2P1-201ENST00000431223 2055 ntBASIC6.26□□□□□ -1.41
CCDC38Q502W7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC38Q502W7 RNA5SP346-201ENST00000363541 121 ntBASIC6.26□□□□□ -1.41
CCDC38Q502W7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 SNORA5.1-201ENST00000384275 131 ntBASIC6.26□□□□□ -1.41
CCDC38Q502W7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 AL353692.2-201ENST00000407054 335 ntBASIC6.26□□□□□ -1.41
CCDC38Q502W7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 HMGB3P10-201ENST00000434734 572 ntBASIC6.26□□□□□ -1.41
CCDC38Q502W7 AL353898.1-201ENST00000444055 238 ntBASIC6.26□□□□□ -1.41
CCDC38Q502W7 GAPDHP23-201ENST00000444823 993 ntBASIC6.26□□□□□ -1.41
CCDC38Q502W7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 RBMY2TP-201ENST00000451162 947 ntBASIC6.26□□□□□ -1.41
CCDC38Q502W7 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC38Q502W7 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC38Q502W7 AC099670.1-201ENST00000455141 783 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms