Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH11P55287 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CDH11P55287 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH11P55287 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH11P55287 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CDH11P55287 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH11P55287 RNA5SP122-201ENST00000384457 108 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AL589994.1-201ENST00000404962 340 ntBASIC5.38□□□□□ -1.55
CDH11P55287 RNA5SP156-201ENST00000410250 110 ntBASIC5.38□□□□□ -1.55
CDH11P55287 DPPA2P2-201ENST00000418220 897 ntBASIC5.38□□□□□ -1.55
CDH11P55287 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH11P55287 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH11P55287 AL389925.1-201ENST00000432257 728 ntBASIC5.38□□□□□ -1.55
CDH11P55287 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH11P55287 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH11P55287 SDC4P-201ENST00000453285 601 ntBASIC5.38□□□□□ -1.55
CDH11P55287 PPIAP27-201ENST00000453800 265 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AC023194.2-201ENST00000465398 406 ntBASIC5.38□□□□□ -1.55
CDH11P55287 RPL12P24-201ENST00000474907 486 ntBASIC5.38□□□□□ -1.55
CDH11P55287 PDCL3P4-201ENST00000489621 720 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AL158068.1-201ENST00000506116 616 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH11P55287 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH11P55287 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH11P55287 UGT2A3P7-201ENST00000510485 734 ntBASIC5.38□□□□□ -1.55
CDH11P55287 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH11P55287 SNORA70.17-201ENST00000516449 133 ntBASIC5.38□□□□□ -1.55
CDH11P55287 RN7SKP238-201ENST00000516483 249 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH11P55287 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH11P55287 OR56A7P-201ENST00000524865 941 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AC027369.2-201ENST00000528030 440 ntBASIC5.38□□□□□ -1.55
CDH11P55287 OR4A42P-201ENST00000531397 938 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AP004609.2-201ENST00000532177 190 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AC090424.1-201ENST00000535243 736 ntBASIC5.38□□□□□ -1.55
CDH11P55287 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH11P55287 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH11P55287 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH11P55287 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH11P55287 NPM1P45-201ENST00000583151 559 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH11P55287 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH11P55287 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH11P55287 AL096712.1-201ENST00000614561 159 ntBASIC5.38□□□□□ -1.55
CDH11P55287 AC104307.1-201ENST00000616142 196 ntBASIC5.38□□□□□ -1.55
CDH11P55287 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH11P55287 AP000720.1-201ENST00000625091 483 ntBASIC5.38□□□□□ -1.55
CDH11P55287 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH11P55287 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CDH11P55287 AC092451.3-201ENST00000625067 1343 ntBASIC5.38□□□□□ -1.55
CDH11P55287 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH11P55287 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH11P55287 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH11P55287 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH11P55287 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
CDH11P55287 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH11P55287 AL513548.1-201ENST00000562904 1724 ntBASIC5.37□□□□□ -1.55
CDH11P55287 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CDH11P55287 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH11P55287 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH11P55287 AC026523.2-201ENST00000625039 7739 ntBASIC5.37□□□□□ -1.55
CDH11P55287 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH11P55287 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CDH11P55287 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH11P55287 MIR130B-202ENST00000385018 82 ntBASIC5.37□□□□□ -1.55
CDH11P55287 RPL11P3-201ENST00000395256 523 ntBASIC5.37□□□□□ -1.55
CDH11P55287 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CDH11P55287 AL132875.1-201ENST00000403623 949 ntBASIC5.37□□□□□ -1.55
CDH11P55287 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH11P55287 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH11P55287 MTND2P11-201ENST00000423638 648 ntBASIC5.37□□□□□ -1.55
CDH11P55287 RPL5P2-201ENST00000429598 854 ntBASIC5.37□□□□□ -1.55
CDH11P55287 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH11P55287 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH11P55287 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH11P55287 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.37□□□□□ -1.55
CDH11P55287 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH11P55287 AC002553.3-201ENST00000453002 341 ntBASIC5.37□□□□□ -1.55
CDH11P55287 FRG2FP-204ENST00000453982 852 ntBASIC5.37□□□□□ -1.55
CDH11P55287 RPL12P39-201ENST00000455456 496 ntBASIC5.37□□□□□ -1.55
CDH11P55287 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH11P55287 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH11P55287 AL603882.1-201ENST00000463059 681 ntBASIC5.37□□□□□ -1.55
CDH11P55287 AC025181.1-201ENST00000477507 416 ntBASIC5.37□□□□□ -1.55
CDH11P55287 LSM3P4-201ENST00000502948 309 ntBASIC5.37□□□□□ -1.55
CDH11P55287 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH11P55287 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH11P55287 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH11P55287 AC078899.1-201ENST00000521432 1185 ntBASIC5.37□□□□□ -1.55
CDH11P55287 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH11P55287 AP003396.4-201ENST00000527574 265 ntBASIC5.37□□□□□ -1.55
CDH11P55287 TRIM51DP-201ENST00000529746 596 ntBASIC5.37□□□□□ -1.55
CDH11P55287 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.37□□□□□ -1.55
CDH11P55287 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH11P55287 AC079905.1-201ENST00000549280 475 ntBASIC5.37□□□□□ -1.55
CDH11P55287 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH11P55287 ZNF322P1-201ENST00000568013 1209 ntBASIC5.37□□□□□ -1.55
CDH11P55287 AL163952.1-202ENST00000569625 600 ntBASIC5.37□□□□□ -1.55
CDH11P55287 AC016839.1-201ENST00000578162 867 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms