Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.66□□□□□ -1.5
CXCL12P48061 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.66□□□□□ -1.5
CXCL12P48061 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 MAPK10-323ENST00000641493 3207 ntBASIC5.66□□□□□ -1.5
CXCL12P48061 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 RMST-210ENST00000640149 2844 ntTSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 AL133243.4-201ENST00000623116 3109 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.65□□□□□ -1.5
CXCL12P48061 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CXCL12P48061 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CXCL12P48061 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.65□□□□□ -1.5
CXCL12P48061 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CXCL12P48061 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CXCL12P48061 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CXCL12P48061 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CXCL12P48061 AL138820.1-201ENST00000617901 5305 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CXCL12P48061 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CXCL12P48061 SNORA67-201ENST00000384423 137 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CXCL12P48061 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.65□□□□□ -1.5
CXCL12P48061 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.65□□□□□ -1.5
CXCL12P48061 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CXCL12P48061 AC108075.1-201ENST00000424692 529 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 OR6D1P-201ENST00000436165 939 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 Z80107.2-201ENST00000445127 392 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.65□□□□□ -1.5
CXCL12P48061 CBX1P2-201ENST00000453841 458 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 HIGD1AP8-201ENST00000453927 274 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 AL389915.2-201ENST00000454576 441 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 RN7SL165P-201ENST00000477476 291 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.65□□□□□ -1.5
CXCL12P48061 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.65□□□□□ -1.5
CXCL12P48061 AP001922.4-201ENST00000526967 290 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CXCL12P48061 HNRNPCP1-201ENST00000556181 766 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 AC007346.2-201ENST00000564816 892 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.65□□□□□ -1.5
CXCL12P48061 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.65□□□□□ -1.5
CXCL12P48061 AC006116.3-201ENST00000592968 361 ntBASIC5.65□□□□□ -1.5
CXCL12P48061 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CXCL12P48061 AC011493.1-201ENST00000596753 1632 ntBASIC5.65□□□□□ -1.51
CXCL12P48061 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CXCL12P48061 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CXCL12P48061 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CXCL12P48061 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CXCL12P48061 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CXCL12P48061 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CXCL12P48061 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CXCL12P48061 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CXCL12P48061 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CXCL12P48061 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CXCL12P48061 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC092111.1-201ENST00000618256 3358 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CXCL12P48061 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CXCL12P48061 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.64□□□□□ -1.51
CXCL12P48061 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CXCL12P48061 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CXCL12P48061 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CXCL12P48061 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CXCL12P48061 SNORA56-201ENST00000383966 129 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 RNU1-106P-201ENST00000384382 164 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC093162.1-201ENST00000419682 124 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CXCL12P48061 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.64□□□□□ -1.51
CXCL12P48061 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.64□□□□□ -1.51
CXCL12P48061 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.64□□□□□ -1.51
CXCL12P48061 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC105399.1-202ENST00000447303 205 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC105384.2-201ENST00000508433 640 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CXCL12P48061 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.64□□□□□ -1.51
CXCL12P48061 OR4A40P-201ENST00000533878 948 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.64□□□□□ -1.51
CXCL12P48061 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.64□□□□□ -1.51
CXCL12P48061 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.64□□□□□ -1.51
CXCL12P48061 AC067852.5-201ENST00000589299 310 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.64□□□□□ -1.51
CXCL12P48061 PCA3_2.1-201ENST00000612507 409 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.64□□□□□ -1.51
CXCL12P48061 AP000550.3-201ENST00000637734 379 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CXCL12P48061 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.64□□□□□ -1.51
CXCL12P48061 FBXL21-201ENST00000297158 1305 ntBASIC5.64□□□□□ -1.51
CXCL12P48061 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms