Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RFC3P40938 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RFC3P40938 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RFC3P40938 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.33□□□□□ -1.56
RFC3P40938 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFC3P40938 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFC3P40938 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 TCP11X1-202ENST00000622971 1372 ntBASIC5.33□□□□□ -1.56
RFC3P40938 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RFC3P40938 AL591135.1-201ENST00000401578 5914 ntBASIC5.33□□□□□ -1.56
RFC3P40938 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFC3P40938 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 RNA5SP211-201ENST00000365516 117 ntBASIC5.33□□□□□ -1.56
RFC3P40938 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 U3.25-201ENST00000391209 220 ntBASIC5.33□□□□□ -1.56
RFC3P40938 RN7SKP166-201ENST00000410812 305 ntBASIC5.33□□□□□ -1.56
RFC3P40938 AC017078.1-201ENST00000416146 368 ntBASIC5.33□□□□□ -1.56
RFC3P40938 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC3P40938 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC3P40938 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC3P40938 AL662874.1-201ENST00000426065 230 ntBASIC5.33□□□□□ -1.56
RFC3P40938 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.33□□□□□ -1.56
RFC3P40938 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC3P40938 AC023141.8-201ENST00000442554 208 ntBASIC5.33□□□□□ -1.56
RFC3P40938 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC3P40938 RPS23P6-201ENST00000466136 431 ntBASIC5.33□□□□□ -1.56
RFC3P40938 AL157777.1-201ENST00000468100 304 ntBASIC5.33□□□□□ -1.56
RFC3P40938 AC099521.1-201ENST00000482557 334 ntBASIC5.33□□□□□ -1.56
RFC3P40938 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC3P40938 NENFP3-201ENST00000503735 313 ntBASIC5.33□□□□□ -1.56
RFC3P40938 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC3P40938 OR7E158P-201ENST00000524483 910 ntBASIC5.33□□□□□ -1.56
RFC3P40938 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 AC022404.1-201ENST00000555320 273 ntBASIC5.33□□□□□ -1.56
RFC3P40938 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC3P40938 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC3P40938 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC3P40938 MIR6768-201ENST00000610734 72 ntBASIC5.33□□□□□ -1.56
RFC3P40938 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFC3P40938 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.33□□□□□ -1.56
RFC3P40938 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.33□□□□□ -1.56
RFC3P40938 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 MFSD8-219ENST00000641228 2559 ntBASIC5.33□□□□□ -1.56
RFC3P40938 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
RFC3P40938 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFC3P40938 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RFC3P40938 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 KYNUP3-201ENST00000574386 1341 ntBASIC5.32□□□□□ -1.56
RFC3P40938 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.32□□□□□ -1.56
RFC3P40938 RNA5SP453-201ENST00000362503 119 ntBASIC5.32□□□□□ -1.56
RFC3P40938 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.32□□□□□ -1.56
RFC3P40938 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RFC3P40938 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 OR2AT2P-201ENST00000413438 905 ntBASIC5.32□□□□□ -1.56
RFC3P40938 AK4P4-201ENST00000419465 646 ntBASIC5.32□□□□□ -1.56
RFC3P40938 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.32□□□□□ -1.56
RFC3P40938 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.32□□□□□ -1.56
RFC3P40938 DEFA9P-201ENST00000433042 285 ntBASIC5.32□□□□□ -1.56
RFC3P40938 AL731534.1-201ENST00000434711 269 ntBASIC5.32□□□□□ -1.56
RFC3P40938 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.32□□□□□ -1.56
RFC3P40938 AL355032.1-201ENST00000472981 438 ntBASIC5.32□□□□□ -1.56
RFC3P40938 PFN1P6-201ENST00000476786 399 ntBASIC5.32□□□□□ -1.56
RFC3P40938 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.32□□□□□ -1.56
RFC3P40938 AC010547.6-201ENST00000571789 193 ntBASIC5.32□□□□□ -1.56
RFC3P40938 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.32□□□□□ -1.56
RFC3P40938 AC018809.2-201ENST00000602436 3823 ntBASIC5.32□□□□□ -1.56
RFC3P40938 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.32□□□□□ -1.56
RFC3P40938 AC004890.3-201ENST00000605566 1095 ntBASIC5.32□□□□□ -1.56
RFC3P40938 AL512624.1-201ENST00000613638 469 ntBASIC5.32□□□□□ -1.56
RFC3P40938 AC241377.1-201ENST00000619797 406 ntBASIC5.32□□□□□ -1.56
RFC3P40938 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.32□□□□□ -1.56
RFC3P40938 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.32□□□□□ -1.56
RFC3P40938 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms