Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-615P-201ENST00000516065 106 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 CYCSP22-201ENST00000517555 339 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 AC022826.1-201ENST00000519383 805 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.68□□□□□ -1.5
HMGCLP35914 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCLP35914 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCLP35914 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.68□□□□□ -1.5
HMGCLP35914 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCLP35914 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCLP35914 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCLP35914 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCLP35914 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCLP35914 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCLP35914 DHFRP1-201ENST00000579682 559 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCLP35914 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCLP35914 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCLP35914 AC015982.1-201ENST00000608113 465 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCLP35914 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCLP35914 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCLP35914 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCLP35914 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCLP35914 AC116158.1-201ENST00000560231 2129 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
HMGCLP35914 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HMGCLP35914 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGCLP35914 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCLP35914 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HMGCLP35914 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
HMGCLP35914 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCLP35914 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCLP35914 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCLP35914 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCLP35914 MIR133A2-201ENST00000347538 102 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCLP35914 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMGCLP35914 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGCLP35914 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCLP35914 VN1R3-201ENST00000418822 919 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 RPL34P3-201ENST00000421454 338 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 MGAT2P2-201ENST00000427194 797 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 AL121578.1-201ENST00000428051 892 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 MTND6P12-201ENST00000428247 522 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 MRE11P1-201ENST00000464884 2127 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCLP35914 AC090568.1-201ENST00000509499 856 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 TRIM51DP-201ENST00000529746 596 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCLP35914 AC137627.1-201ENST00000545761 289 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGCLP35914 HSPE1P2-201ENST00000554777 306 ntBASIC5.67□□□□□ -1.5
HMGCLP35914 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGCLP35914 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGCLP35914 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMGCLP35914 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HMGCLP35914 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCLP35914 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCLP35914 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCLP35914 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCLP35914 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCLP35914 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HMGCLP35914 BRAFP1-201ENST00000445336 2703 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 RNA5SP510-201ENST00000364697 99 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 RNA5SP131-201ENST00000365452 119 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.66□□□□□ -1.5
HMGCLP35914 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCLP35914 OR10T1P-201ENST00000424327 947 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 AC113412.1-201ENST00000425840 504 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCLP35914 AC005297.1-201ENST00000444765 862 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 AC090602.1-201ENST00000469695 252 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCLP35914 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCLP35914 MIR4311-201ENST00000580794 100 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCLP35914 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCLP35914 AL390318.1-201ENST00000624564 687 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HMGCLP35914 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMGCLP35914 AC016745.2-201ENST00000608834 3443 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HMGCLP35914 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HMGCLP35914 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.66□□□□□ -1.5
HMGCLP35914 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HMGCLP35914 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCLP35914 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCLP35914 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms