Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 AC010546.1-201ENST00000569391 485 ntBASIC7.63□□□□□ -1.19
LIG1P18858 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC7.63□□□□□ -1.19
LIG1P18858 AL157899.1-201ENST00000604110 936 ntBASIC7.63□□□□□ -1.19
LIG1P18858 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.63□□□□□ -1.19
LIG1P18858 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.63□□□□□ -1.19
LIG1P18858 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC7.63□□□□□ -1.19
LIG1P18858 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LIG1P18858 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.63□□□□□ -1.19
LIG1P18858 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 AC009220.2-201ENST00000489759 1751 ntBASIC7.63□□□□□ -1.19
LIG1P18858 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.63□□□□□ -1.19
LIG1P18858 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
LIG1P18858 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.63□□□□□ -1.19
LIG1P18858 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 AC027279.1-201ENST00000568885 4284 ntBASIC7.63□□□□□ -1.19
LIG1P18858 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LIG1P18858 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.62□□□□□ -1.19
LIG1P18858 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 AL359263.1-201ENST00000441188 2796 ntBASIC7.62□□□□□ -1.19
LIG1P18858 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.62□□□□□ -1.19
LIG1P18858 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LIG1P18858 Y_RNA.77-201ENST00000362962 107 ntBASIC7.62□□□□□ -1.19
LIG1P18858 RNA5SP514-201ENST00000363717 111 ntBASIC7.62□□□□□ -1.19
LIG1P18858 OR13C3-201ENST00000374781 1108 ntBASIC7.62□□□□□ -1.19
LIG1P18858 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 RPS3AP26-201ENST00000398259 784 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AL603865.2-201ENST00000401679 213 ntBASIC7.62□□□□□ -1.19
LIG1P18858 SETP15-201ENST00000412724 337 ntBASIC7.62□□□□□ -1.19
LIG1P18858 RPL18AP14-201ENST00000417685 526 ntBASIC7.62□□□□□ -1.19
LIG1P18858 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 MTND4LP11-201ENST00000422184 280 ntBASIC7.62□□□□□ -1.19
LIG1P18858 GPN3P1-201ENST00000423883 535 ntBASIC7.62□□□□□ -1.19
LIG1P18858 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.62□□□□□ -1.19
LIG1P18858 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 ISCA1P2-201ENST00000438679 421 ntBASIC7.62□□□□□ -1.19
LIG1P18858 DNAJA1P5-201ENST00000440278 943 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC7.62□□□□□ -1.19
LIG1P18858 AC245517.2-201ENST00000442890 346 ntBASIC7.62□□□□□ -1.19
LIG1P18858 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.62□□□□□ -1.19
LIG1P18858 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 MTND4P18-201ENST00000447010 465 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.62□□□□□ -1.19
LIG1P18858 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 AL157777.1-201ENST00000468100 304 ntBASIC7.62□□□□□ -1.19
LIG1P18858 RN7SL390P-201ENST00000470634 284 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AC022730.1-201ENST00000473114 568 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AC092593.2-201ENST00000513866 913 ntBASIC7.62□□□□□ -1.19
LIG1P18858 MTCYBP44-201ENST00000514835 823 ntBASIC7.62□□□□□ -1.19
LIG1P18858 RN7SKP248-201ENST00000516278 305 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 IGLV3-6-201ENST00000523937 250 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 AC124891.1-201ENST00000536322 519 ntBASIC7.62□□□□□ -1.19
LIG1P18858 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.62□□□□□ -1.19
LIG1P18858 SETP1-201ENST00000556014 845 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.62□□□□□ -1.19
LIG1P18858 AC135628.1-201ENST00000568867 534 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC7.62□□□□□ -1.19
LIG1P18858 AC011921.2-201ENST00000589465 152 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.62□□□□□ -1.19
LIG1P18858 AP003465.2-201ENST00000602571 373 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AC067773.1-201ENST00000603284 1094 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AC097467.4-201ENST00000605504 141 ntBASIC7.62□□□□□ -1.19
LIG1P18858 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.62□□□□□ -1.19
LIG1P18858 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.62□□□□□ -1.19
LIG1P18858 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC7.62□□□□□ -1.19
LIG1P18858 MRPL57P3-201ENST00000619218 176 ntBASIC7.62□□□□□ -1.19
LIG1P18858 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.62□□□□□ -1.19
LIG1P18858 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LIG1P18858 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LIG1P18858 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.62□□□□□ -1.19
LIG1P18858 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LIG1P18858 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIG1P18858 AL353743.3-201ENST00000442109 1468 ntBASIC7.62□□□□□ -1.19
LIG1P18858 MKI67P1-201ENST00000604297 1460 ntBASIC7.62□□□□□ -1.19
LIG1P18858 AC005332.9-201ENST00000620266 2921 ntBASIC7.62□□□□□ -1.19
LIG1P18858 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms