Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 IGLV3-24-201ENST00000517477 197 ntBASIC6.2□□□□□ -1.42
TPM1P09493 AC009879.1-201ENST00000520029 839 ntBASIC6.2□□□□□ -1.42
TPM1P09493 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.2□□□□□ -1.42
TPM1P09493 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.2□□□□□ -1.42
TPM1P09493 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.2□□□□□ -1.42
TPM1P09493 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.2□□□□□ -1.42
TPM1P09493 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.2□□□□□ -1.42
TPM1P09493 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.2□□□□□ -1.42
TPM1P09493 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.2□□□□□ -1.42
TPM1P09493 RN7SL230P-201ENST00000580835 303 ntBASIC6.2□□□□□ -1.42
TPM1P09493 AC005244.1-201ENST00000582566 339 ntBASIC6.2□□□□□ -1.42
TPM1P09493 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.2□□□□□ -1.42
TPM1P09493 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.2□□□□□ -1.42
TPM1P09493 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.2□□□□□ -1.42
TPM1P09493 AC010632.3-201ENST00000611377 369 ntBASIC6.2□□□□□ -1.42
TPM1P09493 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.2□□□□□ -1.42
TPM1P09493 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TPM1P09493 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.2□□□□□ -1.42
TPM1P09493 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.2□□□□□ -1.42
TPM1P09493 AL357140.4-201ENST00000636827 412 ntBASIC6.2□□□□□ -1.42
TPM1P09493 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TPM1P09493 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TPM1P09493 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TPM1P09493 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.2□□□□□ -1.42
TPM1P09493 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.2□□□□□ -1.42
TPM1P09493 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.2□□□□□ -1.42
TPM1P09493 QRSL1P1-201ENST00000400977 1540 ntBASIC6.2□□□□□ -1.42
TPM1P09493 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TPM1P09493 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TPM1P09493 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM1P09493 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM1P09493 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
TPM1P09493 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
TPM1P09493 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM1P09493 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM1P09493 PROS2P-201ENST00000474651 1951 ntBASIC6.19□□□□□ -1.42
TPM1P09493 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
TPM1P09493 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TPM1P09493 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TPM1P09493 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.19□□□□□ -1.42
TPM1P09493 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.19□□□□□ -1.42
TPM1P09493 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.19□□□□□ -1.42
TPM1P09493 AC005077.1-201ENST00000449226 375 ntBASIC6.19□□□□□ -1.42
TPM1P09493 GEMIN2P1-201ENST00000454246 752 ntBASIC6.19□□□□□ -1.42
TPM1P09493 AC004890.1-201ENST00000461005 181 ntBASIC6.19□□□□□ -1.42
TPM1P09493 AL049874.2-201ENST00000492636 288 ntBASIC6.19□□□□□ -1.42
TPM1P09493 AC113367.2-201ENST00000505749 160 ntBASIC6.19□□□□□ -1.42
TPM1P09493 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.19□□□□□ -1.42
TPM1P09493 AC113191.1-201ENST00000517759 403 ntBASIC6.19□□□□□ -1.42
TPM1P09493 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.19□□□□□ -1.42
TPM1P09493 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.19□□□□□ -1.42
TPM1P09493 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TPM1P09493 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.19□□□□□ -1.42
TPM1P09493 LSM3P2-201ENST00000551246 273 ntBASIC6.19□□□□□ -1.42
TPM1P09493 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.19□□□□□ -1.42
TPM1P09493 HMGN1P26-201ENST00000558737 303 ntBASIC6.19□□□□□ -1.42
TPM1P09493 AC092332.1-201ENST00000563684 829 ntBASIC6.19□□□□□ -1.42
TPM1P09493 MT1CP-201ENST00000567054 174 ntBASIC6.19□□□□□ -1.42
TPM1P09493 AL078601.3-201ENST00000573303 535 ntBASIC6.19□□□□□ -1.42
TPM1P09493 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.19□□□□□ -1.42
TPM1P09493 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.19□□□□□ -1.42
TPM1P09493 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TPM1P09493 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.19□□□□□ -1.42
TPM1P09493 FRG1EP-201ENST00000634469 770 ntBASIC6.19□□□□□ -1.42
TPM1P09493 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TPM1P09493 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
TPM1P09493 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.19□□□□□ -1.42
TPM1P09493 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.19□□□□□ -1.42
TPM1P09493 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TPM1P09493 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TPM1P09493 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.19□□□□□ -1.42
TPM1P09493 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TPM1P09493 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TPM1P09493 AC093591.2-201ENST00000565254 3843 ntBASIC6.18□□□□□ -1.42
TPM1P09493 HSPD1P9-201ENST00000420325 1636 ntBASIC6.18□□□□□ -1.42
TPM1P09493 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM1P09493 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM1P09493 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM1P09493 RNA5SP326-201ENST00000363209 110 ntBASIC6.18□□□□□ -1.42
TPM1P09493 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.18□□□□□ -1.42
TPM1P09493 NIFKP3-201ENST00000417799 865 ntBASIC6.18□□□□□ -1.42
TPM1P09493 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.18□□□□□ -1.42
TPM1P09493 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.18□□□□□ -1.42
TPM1P09493 AC073465.2-201ENST00000440938 498 ntBASIC6.18□□□□□ -1.42
TPM1P09493 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.18□□□□□ -1.42
TPM1P09493 HMGB1P7-201ENST00000450921 612 ntBASIC6.18□□□□□ -1.42
TPM1P09493 AC098847.1-201ENST00000473094 348 ntBASIC6.18□□□□□ -1.42
TPM1P09493 RNA5SP441-201ENST00000516809 88 ntBASIC6.18□□□□□ -1.42
TPM1P09493 WBP1LP3-201ENST00000523033 208 ntBASIC6.18□□□□□ -1.42
TPM1P09493 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM1P09493 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM1P09493 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.18□□□□□ -1.42
TPM1P09493 AC068768.2-201ENST00000602352 343 ntBASIC6.18□□□□□ -1.42
TPM1P09493 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.18□□□□□ -1.42
TPM1P09493 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.18□□□□□ -1.42
TPM1P09493 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM1P09493 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.18□□□□□ -1.42
TPM1P09493 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TPM1P09493 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.18□□□□□ -1.42
TPM1P09493 MTCO1P7-201ENST00000419523 1542 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms