Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC083899.1-201ENST00000454465 3819 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 BCORP1-203ENST00000513194 5093 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 MARK2P4-201ENST00000503381 2380 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 RNA5SP122-201ENST00000384457 108 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 U3.28-201ENST00000391249 210 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 GAPDHP42-201ENST00000406848 981 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 CDY17P-201ENST00000414121 1282 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 RIMKLBP2-201ENST00000424737 654 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 RPL7P56-201ENST00000429441 717 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC138761.5-201ENST00000433967 325 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AP000281.1-201ENST00000444036 316 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC092106.1-201ENST00000444291 373 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AL161636.2-201ENST00000445179 927 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 RBM22P12-201ENST00000567098 1255 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC233699.1-201ENST00000569955 1168 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC012616.1-201ENST00000600294 197 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC009237.12-201ENST00000604755 742 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 PCA3_2.1-201ENST00000612507 409 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 RNA5SP440-201ENST00000612665 119 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 RN7SL787P-201ENST00000613000 284 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 AC089998.1-201ENST00000548575 3141 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DQB2P05538 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 BX276092.6-201ENST00000430476 250 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AC019185.1-201ENST00000442718 389 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 IGBP1P3-201ENST00000447449 1000 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 BX276092.8-201ENST00000455722 250 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 LDHBP2-201ENST00000456969 1005 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AC117394.1-201ENST00000477323 567 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AC074087.1-201ENST00000512059 724 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 NRBF2P4-201ENST00000520874 850 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 OR4A17P-201ENST00000526032 904 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 MIR4505-201ENST00000582238 73 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AC009237.13-201ENST00000603193 276 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AL118522.2-201ENST00000616045 615 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AC103703.1-201ENST00000634783 663 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 AC007938.2-201ENST00000604666 2634 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms