Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL049779.3-201ENST00000557141 606 ntBASIC6.24□□□□□ -1.41
CHRNA1P02708 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.24□□□□□ -1.41
CHRNA1P02708 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.24□□□□□ -1.41
CHRNA1P02708 MIR6837-201ENST00000620884 64 ntBASIC6.24□□□□□ -1.41
CHRNA1P02708 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.24□□□□□ -1.41
CHRNA1P02708 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.24□□□□□ -1.41
CHRNA1P02708 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CHRNA1P02708 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHRNA1P02708 AC012078.1-201ENST00000405035 1646 ntBASIC6.24□□□□□ -1.41
CHRNA1P02708 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CHRNA1P02708 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHRNA1P02708 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.24□□□□□ -1.41
CHRNA1P02708 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHRNA1P02708 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHRNA1P02708 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHRNA1P02708 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.23□□□□□ -1.41
CHRNA1P02708 MFSD8-239ENST00000641590 2479 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.23□□□□□ -1.41
CHRNA1P02708 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHRNA1P02708 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.23□□□□□ -1.41
CHRNA1P02708 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.23□□□□□ -1.41
CHRNA1P02708 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHRNA1P02708 RN7SKP28-201ENST00000364770 305 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CHRNA1P02708 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.23□□□□□ -1.41
CHRNA1P02708 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.23□□□□□ -1.41
CHRNA1P02708 NANOGP4-201ENST00000427230 913 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CHRNA1P02708 CYCSP12-201ENST00000437729 300 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 GAPDHP58-201ENST00000438477 1006 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.23□□□□□ -1.41
CHRNA1P02708 VDAC2P4-201ENST00000452925 711 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.23□□□□□ -1.41
CHRNA1P02708 RN7SL30P-201ENST00000488416 306 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.23□□□□□ -1.41
CHRNA1P02708 AC105384.2-201ENST00000508433 640 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.23□□□□□ -1.41
CHRNA1P02708 AC021146.10-201ENST00000515628 706 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 AP001804.1-201ENST00000526868 919 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 AC090424.1-201ENST00000535243 736 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.23□□□□□ -1.41
CHRNA1P02708 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.23□□□□□ -1.41
CHRNA1P02708 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.23□□□□□ -1.41
CHRNA1P02708 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.23□□□□□ -1.41
CHRNA1P02708 PPATP2-201ENST00000605635 508 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 AL512329.2-201ENST00000607350 548 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 AL138960.1-201ENST00000613838 513 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 AC090607.5-201ENST00000615692 224 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.23□□□□□ -1.41
CHRNA1P02708 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.23□□□□□ -1.41
CHRNA1P02708 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.23□□□□□ -1.41
CHRNA1P02708 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHRNA1P02708 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHRNA1P02708 AL161912.4-201ENST00000623889 2468 ntBASIC6.23□□□□□ -1.41
CHRNA1P02708 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHRNA1P02708 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CHRNA1P02708 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHRNA1P02708 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHRNA1P02708 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
CHRNA1P02708 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 AP000432.2-201ENST00000624164 2048 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CHRNA1P02708 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CHRNA1P02708 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.22□□□□□ -1.41
CHRNA1P02708 RNA5SP183-201ENST00000362452 119 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CHRNA1P02708 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.22□□□□□ -1.41
CHRNA1P02708 RPS6P23-201ENST00000413224 722 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 RPL7L1P9-201ENST00000431298 745 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.22□□□□□ -1.41
CHRNA1P02708 AC006335.2-201ENST00000437993 330 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.22□□□□□ -1.41
CHRNA1P02708 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.22□□□□□ -1.41
CHRNA1P02708 AC005532.2-201ENST00000467154 373 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 AC093270.2-201ENST00000486157 792 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.22□□□□□ -1.41
CHRNA1P02708 PGAM1P13-201ENST00000507497 754 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 RN7SKP67-201ENST00000515905 235 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.22□□□□□ -1.41
CHRNA1P02708 AC016839.1-201ENST00000578162 867 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.22□□□□□ -1.41
CHRNA1P02708 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.22□□□□□ -1.41
CHRNA1P02708 AC008536.1-201ENST00000602872 669 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.22□□□□□ -1.41
CHRNA1P02708 MIR6730-201ENST00000622213 67 ntBASIC6.22□□□□□ -1.41
CHRNA1P02708 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.22□□□□□ -1.41
CHRNA1P02708 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.22□□□□□ -1.41
CHRNA1P02708 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.22□□□□□ -1.41
CHRNA1P02708 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHRNA1P02708 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms