Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.73□□□□□ -1.49
LDLRP01130 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.73□□□□□ -1.49
LDLRP01130 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.73□□□□□ -1.49
LDLRP01130 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
LDLRP01130 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
LDLRP01130 SNORA43.1-201ENST00000364863 140 ntBASIC5.73□□□□□ -1.49
LDLRP01130 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
LDLRP01130 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.73□□□□□ -1.49
LDLRP01130 AC009506.2-201ENST00000420635 840 ntBASIC5.73□□□□□ -1.49
LDLRP01130 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.73□□□□□ -1.49
LDLRP01130 MRPS21P2-201ENST00000424704 264 ntBASIC5.73□□□□□ -1.49
LDLRP01130 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 BX276092.6-201ENST00000430476 250 ntBASIC5.73□□□□□ -1.49
LDLRP01130 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.73□□□□□ -1.49
LDLRP01130 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.73□□□□□ -1.49
LDLRP01130 AL590004.3-202ENST00000445883 451 ntBASIC5.73□□□□□ -1.49
LDLRP01130 PPIAP7-201ENST00000454070 489 ntBASIC5.73□□□□□ -1.49
LDLRP01130 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.73□□□□□ -1.49
LDLRP01130 BX276092.8-201ENST00000455722 250 ntBASIC5.73□□□□□ -1.49
LDLRP01130 AC023141.9-201ENST00000458734 412 ntBASIC5.73□□□□□ -1.49
LDLRP01130 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.73□□□□□ -1.49
LDLRP01130 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.73□□□□□ -1.49
LDLRP01130 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.73□□□□□ -1.49
LDLRP01130 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.73□□□□□ -1.49
LDLRP01130 AP000620.1-201ENST00000527147 504 ntBASIC5.73□□□□□ -1.49
LDLRP01130 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.73□□□□□ -1.49
LDLRP01130 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 AC007956.1-201ENST00000555623 542 ntBASIC5.73□□□□□ -1.49
LDLRP01130 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.73□□□□□ -1.49
LDLRP01130 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.73□□□□□ -1.49
LDLRP01130 AC005224.3-201ENST00000584683 2140 ntBASIC5.73□□□□□ -1.49
LDLRP01130 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.73□□□□□ -1.49
LDLRP01130 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.73□□□□□ -1.49
LDLRP01130 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.73□□□□□ -1.49
LDLRP01130 AC092681.3-201ENST00000609463 678 ntBASIC5.73□□□□□ -1.49
LDLRP01130 OR7A1P-202ENST00000641542 1158 ntBASIC5.73□□□□□ -1.49
LDLRP01130 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
LDLRP01130 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
LDLRP01130 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.73□□□□□ -1.49
LDLRP01130 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.73□□□□□ -1.49
LDLRP01130 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LDLRP01130 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
LDLRP01130 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.72□□□□□ -1.49
LDLRP01130 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
LDLRP01130 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LDLRP01130 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LDLRP01130 RNA5SP477-201ENST00000362639 119 ntBASIC5.72□□□□□ -1.49
LDLRP01130 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.72□□□□□ -1.49
LDLRP01130 AL589994.1-201ENST00000404962 340 ntBASIC5.72□□□□□ -1.49
LDLRP01130 MIR1178-201ENST00000408396 91 ntBASIC5.72□□□□□ -1.49
LDLRP01130 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.72□□□□□ -1.49
LDLRP01130 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.72□□□□□ -1.49
LDLRP01130 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.72□□□□□ -1.49
LDLRP01130 AL354766.1-201ENST00000423396 542 ntBASIC5.72□□□□□ -1.49
LDLRP01130 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.72□□□□□ -1.49
LDLRP01130 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.72□□□□□ -1.49
LDLRP01130 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 RSL24D1P8-201ENST00000434442 492 ntBASIC5.72□□□□□ -1.49
LDLRP01130 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LDLRP01130 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.72□□□□□ -1.49
LDLRP01130 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.72□□□□□ -1.49
LDLRP01130 DEFB109A-201ENST00000482450 265 ntBASIC5.72□□□□□ -1.49
LDLRP01130 CR383656.1-201ENST00000484916 377 ntBASIC5.72□□□□□ -1.49
LDLRP01130 AL158068.1-201ENST00000506116 616 ntBASIC5.72□□□□□ -1.49
LDLRP01130 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.72□□□□□ -1.49
LDLRP01130 AP002981.1-201ENST00000517692 975 ntBASIC5.72□□□□□ -1.49
LDLRP01130 OR8Q1P-201ENST00000526467 655 ntBASIC5.72□□□□□ -1.49
LDLRP01130 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.72□□□□□ -1.49
LDLRP01130 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.72□□□□□ -1.49
LDLRP01130 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.72□□□□□ -1.49
LDLRP01130 AC092865.1-201ENST00000544395 1023 ntBASIC5.72□□□□□ -1.49
LDLRP01130 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LDLRP01130 AC068305.2-201ENST00000550567 1205 ntBASIC5.72□□□□□ -1.49
LDLRP01130 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.72□□□□□ -1.49
LDLRP01130 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.72□□□□□ -1.49
LDLRP01130 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.72□□□□□ -1.49
LDLRP01130 AC005332.4-201ENST00000592752 579 ntBASIC5.72□□□□□ -1.49
LDLRP01130 AC117490.2-201ENST00000610042 594 ntBASIC5.72□□□□□ -1.49
LDLRP01130 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.72□□□□□ -1.49
LDLRP01130 AC010998.3-201ENST00000613871 631 ntBASIC5.72□□□□□ -1.49
LDLRP01130 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.72□□□□□ -1.49
LDLRP01130 AC104820.1-201ENST00000624183 307 ntBASIC5.72□□□□□ -1.49
LDLRP01130 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms