Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
PDGFBP01127 AL513548.1-201ENST00000562904 1724 ntBASIC5.9□□□□□ -1.47
PDGFBP01127 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.9□□□□□ -1.47
PDGFBP01127 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFBP01127 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFBP01127 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFBP01127 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFBP01127 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFBP01127 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFBP01127 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.9□□□□□ -1.47
PDGFBP01127 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFBP01127 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFBP01127 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PDGFBP01127 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFBP01127 AL359195.2-201ENST00000623657 4412 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
PDGFBP01127 AL713922.1-201ENST00000416477 747 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFBP01127 AL049745.1-201ENST00000433953 286 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFBP01127 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFBP01127 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFBP01127 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.89□□□□□ -1.47
PDGFBP01127 OR52Y1P-201ENST00000452418 828 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 RPS29P22-201ENST00000472363 168 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFBP01127 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFBP01127 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFBP01127 AC021678.3-201ENST00000517893 476 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFBP01127 AP001922.4-201ENST00000526967 290 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 AC022832.1-201ENST00000530718 645 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 AC073916.1-201ENST00000545095 130 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 AC027667.1-201ENST00000545814 304 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.89□□□□□ -1.47
PDGFBP01127 AC074050.1-201ENST00000563247 211 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFBP01127 AC119403.2-201ENST00000590960 598 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 AL583832.1-201ENST00000603227 784 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFBP01127 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFBP01127 FAM25E-202ENST00000608562 189 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFBP01127 AC132068.1-201ENST00000623805 459 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 FBXL21-201ENST00000297158 1305 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFBP01127 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFBP01127 WBP11P1-201ENST00000562560 1931 ntBASIC5.89□□□□□ -1.47
PDGFBP01127 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PDGFBP01127 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.89□□□□□ -1.47
PDGFBP01127 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFBP01127 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFBP01127 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFBP01127 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 AL359091.1-201ENST00000449048 1734 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFBP01127 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFBP01127 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFBP01127 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 RN7SKP166-201ENST00000410812 305 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFBP01127 CYP4F30P-202ENST00000420048 405 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 OR5W1P-201ENST00000423705 938 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFBP01127 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.88□□□□□ -1.47
PDGFBP01127 AL590399.4-201ENST00000436561 601 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFBP01127 AC011742.2-201ENST00000443818 352 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.88□□□□□ -1.47
PDGFBP01127 AL451063.1-201ENST00000450164 1133 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 AL450023.1-201ENST00000450868 751 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 RPS29P33-201ENST00000456717 146 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFBP01127 AC087672.1-201ENST00000479876 766 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.88□□□□□ -1.47
PDGFBP01127 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.88□□□□□ -1.47
PDGFBP01127 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFBP01127 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PDGFBP01127 AC126177.5-201ENST00000549599 178 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.88□□□□□ -1.47
PDGFBP01127 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
PDGFBP01127 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms