Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SDCBPO00560 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.75□□□□□ -1.65
SDCBPO00560 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SDCBPO00560 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SDCBPO00560 AC002525.1-201ENST00000624392 1622 ntBASIC4.75□□□□□ -1.65
SDCBPO00560 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SDCBPO00560 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.75□□□□□ -1.65
SDCBPO00560 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.75□□□□□ -1.65
SDCBPO00560 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SDCBPO00560 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SDCBPO00560 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.74□□□□□ -1.65
SDCBPO00560 AP000473.2-201ENST00000602659 1537 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SDCBPO00560 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SDCBPO00560 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
SDCBPO00560 VN1R110P-201ENST00000438988 971 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.74□□□□□ -1.65
SDCBPO00560 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.74□□□□□ -1.65
SDCBPO00560 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.74□□□□□ -1.65
SDCBPO00560 CTSLP6-201ENST00000458273 1002 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 DEFB109A-201ENST00000482450 265 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.74□□□□□ -1.65
SDCBPO00560 AC074255.1-201ENST00000511259 501 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 OR5H7P-201ENST00000514084 930 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 Vault.2-201ENST00000516519 98 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 AC139365.2-201ENST00000517972 253 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.74□□□□□ -1.65
SDCBPO00560 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.74□□□□□ -1.65
SDCBPO00560 AC122688.1-201ENST00000541494 223 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.74□□□□□ -1.65
SDCBPO00560 AL356801.1-201ENST00000559320 294 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.74□□□□□ -1.65
SDCBPO00560 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.74□□□□□ -1.65
SDCBPO00560 AC019322.1-201ENST00000571869 389 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.74□□□□□ -1.65
SDCBPO00560 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SDCBPO00560 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.74□□□□□ -1.65
SDCBPO00560 AL583832.1-201ENST00000603227 784 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 AC009779.8-202ENST00000607990 932 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 AC129778.1-202ENST00000623812 261 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 AL591379.1-207ENST00000635982 261 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 AL596275.2-207ENST00000641188 675 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 AC079097.1-201ENST00000512187 1399 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SDCBPO00560 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 MAPK10-338ENST00000641647 3362 ntBASIC4.74□□□□□ -1.65
SDCBPO00560 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SDCBPO00560 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SDCBPO00560 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SDCBPO00560 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SDCBPO00560 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SDCBPO00560 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SDCBPO00560 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.73□□□□□ -1.65
SDCBPO00560 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.73□□□□□ -1.65
SDCBPO00560 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SDCBPO00560 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.73□□□□□ -1.65
SDCBPO00560 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SDCBPO00560 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SDCBPO00560 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
SDCBPO00560 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
SDCBPO00560 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
SDCBPO00560 AC004386.1-201ENST00000393214 761 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.73□□□□□ -1.65
SDCBPO00560 AL357752.1-201ENST00000412817 349 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 MRPL53P1-201ENST00000414323 319 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 HYALP1-201ENST00000417674 1279 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 NIFKP3-201ENST00000417799 865 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 AK4P4-201ENST00000419465 646 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.73□□□□□ -1.65
SDCBPO00560 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SDCBPO00560 NDUFS5P5-201ENST00000437256 321 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 PCBP2P1-201ENST00000437262 977 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.73□□□□□ -1.65
SDCBPO00560 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.73□□□□□ -1.65
SDCBPO00560 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.73□□□□□ -1.65
SDCBPO00560 NXT1P1-201ENST00000458481 316 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 AP002884.1-201ENST00000479691 655 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.73□□□□□ -1.65
SDCBPO00560 RN7SL649P-201ENST00000496974 275 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 AC025458.1-201ENST00000506046 166 ntBASIC4.73□□□□□ -1.65
SDCBPO00560 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.73□□□□□ -1.65
SDCBPO00560 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.73□□□□□ -1.65
SDCBPO00560 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.73□□□□□ -1.65
SDCBPO00560 Y_RNA.667-201ENST00000516212 107 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms