Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AL031595.2-201ENST00000624215 19071 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AC100757.1-201ENST00000616872 1835 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 SNORD56.6-201ENST00000384569 71 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AL009179.1-201ENST00000406085 265 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 RN7SKP86-201ENST00000410454 332 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 BX119904.3-201ENST00000428194 957 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 CLNS1AP1-201ENST00000435954 682 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 PPIAP27-201ENST00000453800 265 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AP003033.2-201ENST00000528901 805 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AC009779.8-202ENST00000607990 932 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 AC026367.3-201ENST00000619032 590 ntBASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM49D1C9J1S8 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 MT-RNR2-201ENST00000387347 1559 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 RN7SKP186-201ENST00000365371 303 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 RNA5SP241-201ENST00000391326 114 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 RPS17P15-201ENST00000475609 349 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AC130364.2-201ENST00000528639 604 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 RN7SL290P-201ENST00000578661 300 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 H3F3BP2-201ENST00000583907 357 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AC063977.5-201ENST00000601044 974 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AC108738.1-201ENST00000603703 237 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AC092944.2-201ENST00000605443 889 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 CAP1P2-201ENST00000417455 1409 ntBASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM49D1C9J1S8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC003973.3-201ENST00000624863 2822 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms