Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 REREP1Y-201ENST00000422655 198 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 SETP9-201ENST00000423837 832 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 CRIP1P1-201ENST00000427567 185 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 RPL12P18-201ENST00000437175 325 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 REREP2Y-201ENST00000439103 200 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 NPM1P19-201ENST00000450070 712 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 PFN1P8-201ENST00000497012 543 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 NPM1P21-201ENST00000513394 762 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 OR5H7P-201ENST00000514084 930 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 Y_RNA.667-201ENST00000516212 107 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 RNA5SP438-201ENST00000516561 112 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 TRIM77BP-201ENST00000524985 1119 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 MIR4260-201ENST00000583107 67 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 NANOGP3-201ENST00000605855 286 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 AC005261.6-201ENST00000623072 1387 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 AC005261.2-201ENST00000593427 4258 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AC011755.1-201ENST00000623763 2049 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 VN1R21P-201ENST00000426703 765 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 NDUFS5P5-201ENST00000437256 321 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AC015983.1-201ENST00000441577 373 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 OR52E7P-201ENST00000452394 933 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 ACA64.1-201ENST00000459171 127 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 KATNBL1P4-201ENST00000503545 918 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 SEPT10P1-201ENST00000517342 1162 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AC060775.1-201ENST00000518241 520 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 COX6CP7-201ENST00000597056 208 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AL138895.2-201ENST00000603019 178 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AC120036.2-201ENST00000509729 1474 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AC018809.2-201ENST00000602436 3823 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 AL449283.1-201ENST00000602631 3403 ntBASIC5.25□□□□□ -1.57
TRAPPC4Q9Y296 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms