Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RN7SL466P-201ENST00000497546 295 ntBASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 GAPDHP71-201ENST00000511530 1003 ntBASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 HMGN2P36-201ENST00000529541 409 ntBASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 AC020916.2-201ENST00000591242 360 ntBASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 FO393422.1-201ENST00000603908 708 ntBASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 AP000864.1-201ENST00000609424 650 ntBASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 AL691477.1-201ENST00000624398 162 ntBASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 AP005432.1-201ENST00000580891 3485 ntBASIC5.9□□□□□ -1.46
TM9SF3Q9HD45 AC125336.1-201ENST00000508893 2827 ntBASIC5.9□□□□□ -1.47
TM9SF3Q9HD45 CCNT2P1-201ENST00000423082 1315 ntBASIC5.9□□□□□ -1.47
TM9SF3Q9HD45 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
TM9SF3Q9HD45 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
TM9SF3Q9HD45 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TM9SF3Q9HD45 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TM9SF3Q9HD45 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TM9SF3Q9HD45 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TM9SF3Q9HD45 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
TM9SF3Q9HD45 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
TM9SF3Q9HD45 AC096921.2-201ENST00000561507 1916 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AL161912.4-201ENST00000623889 2468 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 RNA5SP46-201ENST00000362370 120 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 RN7SKP160-201ENST00000363804 340 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 RNA5SP394-201ENST00000364216 119 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 HMGB1P20-201ENST00000402555 677 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 OR2AT2P-201ENST00000413438 905 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AK4P4-201ENST00000419465 646 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AL034379.1-201ENST00000423216 253 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AL445928.1-201ENST00000435545 222 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 RPS7P3-201ENST00000443360 580 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 RPL23AP60-201ENST00000450011 454 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AC109481.1-201ENST00000509173 282 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 MIR4505-201ENST00000582238 73 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AC119403.2-201ENST00000590960 598 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AC015660.5-201ENST00000623238 564 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AC093671.1-201ENST00000624981 2929 ntBASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TM9SF3Q9HD45 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 RNA5SP132-201ENST00000364725 118 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms