Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCDH9Q9HC56 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 RNA5SP273-201ENST00000362484 113 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 RNA5SP477-201ENST00000362639 119 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 RN7SKP185-201ENST00000362813 326 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 RNU4-23P-201ENST00000362839 140 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 SUGT1P2-201ENST00000379452 992 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 MIR621-201ENST00000384919 96 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 RN7SKP240-201ENST00000410583 375 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 BX284632.2-201ENST00000421091 399 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 TRGV7-201ENST00000427089 353 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC138761.5-201ENST00000433967 325 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 VN1R110P-201ENST00000438988 971 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AL512605.1-202ENST00000441919 381 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AL359955.2-201ENST00000445380 353 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 OR52E7P-201ENST00000452394 933 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 PFN1P8-201ENST00000497012 543 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 GAPDHP62-201ENST00000515313 990 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC021146.10-201ENST00000515628 706 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 Y_RNA.667-201ENST00000516212 107 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 RNA5SP438-201ENST00000516561 112 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC091078.2-201ENST00000557145 559 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 NPM1P5-201ENST00000557228 838 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC125494.2-201ENST00000602431 657 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 RNA5SP439-201ENST00000617595 124 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC129778.1-202ENST00000623812 261 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AL591379.1-207ENST00000635982 261 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 OR11H2-202ENST00000641517 1085 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC117409.1-201ENST00000470499 1310 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 AC092451.3-201ENST00000625067 1343 ntBASIC5.96□□□□□ -1.46
PCDH9Q9HC56 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
PCDH9Q9HC56 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AL122020.1-201ENST00000472287 459 ntBASIC5.95□□□□□ -1.46
PCDH9Q9HC56 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC093815.1-201ENST00000508637 280 ntBASIC5.95□□□□□ -1.46
PCDH9Q9HC56 CCNHP1-201ENST00000513311 678 ntBASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AL133445.2-201ENST00000611191 527 ntBASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AL035661.1-201ENST00000620459 1144 ntBASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC104820.1-201ENST00000624183 307 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms