Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 DNM1P47-203ENST00000571780 12667 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC090220.1-201ENST00000593078 1699 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 FANCD2P2-201ENST00000437591 1400 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 GUCY1B2-204ENST00000531898 1979 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC023245.2-201ENST00000530760 2978 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 RNA5SP308-201ENST00000362532 115 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 RNU1-5P-201ENST00000362684 144 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC026310.1-201ENST00000396004 378 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 RANP6-201ENST00000413691 644 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 DPPA2P2-201ENST00000418220 897 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 RPL24P2-201ENST00000421023 475 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 GAPDHP19-201ENST00000431768 1005 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 MTCO2P6-201ENST00000463134 685 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 RN7SL83P-201ENST00000468131 297 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 OR9A1P-202ENST00000484361 945 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 RPL29P23-201ENST00000486188 442 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AL117692.1-201ENST00000494283 713 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC069306.1-201ENST00000507006 843 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 OR8G5-201ENST00000524943 1041 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC019322.1-201ENST00000571869 389 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 TXNP4-201ENST00000575018 310 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 RPL7AP69-201ENST00000595306 806 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC011492.1-201ENST00000600023 315 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 MTCO3P22-201ENST00000603219 784 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 MIR6085-201ENST00000618314 110 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 AL133370.2-201ENST00000619934 439 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 Z99129.2-201ENST00000619967 314 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC005514.1-201ENST00000623521 208 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC068213.1-201ENST00000625124 226 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC103703.1-201ENST00000634783 663 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 MTND2P41-201ENST00000637599 773 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC010132.4-201ENST00000569883 1368 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AC092692.1-201ENST00000623625 2595 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNX18Q96RF0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SNX18Q96RF0 SMG1P5-202ENST00000529428 4219 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 SMG1P2-201ENST00000566127 4221 ntBASIC5.75□□□□□ -1.49
SNX18Q96RF0 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX18Q96RF0 SAGE3P-201ENST00000619800 1635 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC010266.2-201ENST00000564741 3255 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX18Q96RF0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC010894.1-201ENST00000313760 361 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX18Q96RF0 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX18Q96RF0 RNA5SP453-201ENST00000362503 119 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 RNA5SP478-201ENST00000364657 115 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms