Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
CCDC65Q8IXS2 AC004076.2-201ENST00000620532 3323 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC010266.2-201ENST00000564741 3255 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC138907.8-201ENST00000623981 2256 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 OR7E25P-201ENST00000344844 931 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC087752.1-201ENST00000391360 558 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AL022331.1-201ENST00000429025 477 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AP006222.1-205ENST00000450734 457 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC090602.1-201ENST00000469695 252 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 RPSAP37-201ENST00000470913 821 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 SNORA70.20-201ENST00000516848 126 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC005363.1-201ENST00000530779 351 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AL353729.2-201ENST00000605859 1249 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC079776.5-201ENST00000641920 211 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AP005432.1-201ENST00000580891 3485 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AL355834.1-201ENST00000556602 3965 ntBASIC6.33□□□□□ -1.4
CCDC65Q8IXS2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 RPS3AP2-201ENST00000407190 754 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC245060.4-201ENST00000413293 1121 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 RNF10P1-201ENST00000418589 369 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 OR10T1P-201ENST00000424327 947 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 CDY8P-201ENST00000428380 1279 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 CDY20P-201ENST00000447528 1279 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC011476.1-201ENST00000466725 307 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC006499.4-201ENST00000510947 694 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 GAPDHP62-201ENST00000515313 990 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC136777.2-201ENST00000522979 358 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC137627.1-201ENST00000545761 289 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 DHFRP1-201ENST00000579682 559 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC016542.2-201ENST00000624201 619 ntBASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC65Q8IXS2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCDC65Q8IXS2 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms