Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MTND4P22-201ENST00000413116 1169 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 FAM183DP-201ENST00000421987 399 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 GPN3P1-201ENST00000423883 535 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 PTGES3P1-201ENST00000439531 483 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC234771.2-201ENST00000445718 597 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 YRDCP3-201ENST00000456507 480 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 RPS7P10-201ENST00000464254 603 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 MTND4LP3-201ENST00000468320 276 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 RPL5P11-201ENST00000498068 893 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 RNU6-1129P-201ENST00000515964 104 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 MTCO1P49-201ENST00000523429 802 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC092375.1-201ENST00000550410 637 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC008015.1-201ENST00000555505 465 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC011921.2-201ENST00000589465 152 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 BMS1P7-201ENST00000602440 1052 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL592494.3-201ENST00000609485 464 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL359513.1-201ENST00000614364 557 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC131009.3-201ENST00000621809 287 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC079298.1-201ENST00000625026 1619 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL591848.4-201ENST00000567832 3472 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL356317.1-201ENST00000396110 1436 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC092451.3-201ENST00000625067 1343 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AP004289.1-201ENST00000436307 2205 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 RPL10P10-201ENST00000403509 664 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AL356320.2-201ENST00000417263 507 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AL035407.1-201ENST00000429211 571 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AL445567.1-201ENST00000439121 144 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AL353898.1-201ENST00000444055 238 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 TVP23CP1-201ENST00000450317 639 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AC104849.1-201ENST00000462623 405 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AC008837.1-201ENST00000511513 412 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AC104417.1-201ENST00000523974 751 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AL049830.4-201ENST00000555149 351 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AC004232.1-201ENST00000571388 208 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 MIR3157-201ENST00000578688 85 ntBASIC6.48□□□□□ -1.37
TRIM48Q8IWZ4 AC015688.2-201ENST00000584523 262 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms