Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VSX2P58304 AL159987.1-201ENST00000347911 293 ntBASIC5.5□□□□□ -1.53
VSX2P58304 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
VSX2P58304 SNORA17A-201ENST00000391185 133 ntBASIC5.5□□□□□ -1.53
VSX2P58304 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.5□□□□□ -1.53
VSX2P58304 CDY17P-201ENST00000414121 1282 ntBASIC5.5□□□□□ -1.53
VSX2P58304 TRGV5P-201ENST00000419915 354 ntBASIC5.5□□□□□ -1.53
VSX2P58304 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.5□□□□□ -1.53
VSX2P58304 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.5□□□□□ -1.53
VSX2P58304 RPL34P3-201ENST00000421454 338 ntBASIC5.5□□□□□ -1.53
VSX2P58304 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.5□□□□□ -1.53
VSX2P58304 AL022331.1-201ENST00000429025 477 ntBASIC5.5□□□□□ -1.53
VSX2P58304 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.5□□□□□ -1.53
VSX2P58304 GAPDHP48-201ENST00000436626 961 ntBASIC5.5□□□□□ -1.53
VSX2P58304 SUMO2P3-201ENST00000438311 288 ntBASIC5.5□□□□□ -1.53
VSX2P58304 AL390879.1-201ENST00000439143 386 ntBASIC5.5□□□□□ -1.53
VSX2P58304 NXT1P1-201ENST00000458481 316 ntBASIC5.5□□□□□ -1.53
VSX2P58304 AC009120.1-201ENST00000493458 473 ntBASIC5.5□□□□□ -1.53
VSX2P58304 OR7E157P-201ENST00000494376 911 ntBASIC5.5□□□□□ -1.53
VSX2P58304 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.5□□□□□ -1.53
VSX2P58304 AC105384.2-201ENST00000508433 640 ntBASIC5.5□□□□□ -1.53
VSX2P58304 AC078899.1-201ENST00000521432 1185 ntBASIC5.5□□□□□ -1.53
VSX2P58304 HMGB1P42-201ENST00000532126 553 ntBASIC5.5□□□□□ -1.53
VSX2P58304 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.5□□□□□ -1.53
VSX2P58304 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.5□□□□□ -1.53
VSX2P58304 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.5□□□□□ -1.53
VSX2P58304 RN7SL787P-201ENST00000613000 284 ntBASIC5.5□□□□□ -1.53
VSX2P58304 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.5□□□□□ -1.53
VSX2P58304 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.5□□□□□ -1.53
VSX2P58304 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.5□□□□□ -1.53
VSX2P58304 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.5□□□□□ -1.53
VSX2P58304 SNORA17.5-201ENST00000630429 132 ntBASIC5.5□□□□□ -1.53
VSX2P58304 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.5□□□□□ -1.53
VSX2P58304 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
VSX2P58304 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
VSX2P58304 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 AL161912.4-201ENST00000623889 2468 ntBASIC5.5□□□□□ -1.53
VSX2P58304 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
VSX2P58304 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VSX2P58304 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VSX2P58304 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VSX2P58304 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VSX2P58304 OR13C1P-202ENST00000641378 2919 ntBASIC5.49□□□□□ -1.53
VSX2P58304 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.49□□□□□ -1.53
VSX2P58304 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.49□□□□□ -1.53
VSX2P58304 SNORA64.1-201ENST00000362600 132 ntBASIC5.49□□□□□ -1.53
VSX2P58304 RNA5SP178-201ENST00000410380 128 ntBASIC5.49□□□□□ -1.53
VSX2P58304 RMRPP5-201ENST00000411156 267 ntBASIC5.49□□□□□ -1.53
VSX2P58304 OR2AT2P-201ENST00000413438 905 ntBASIC5.49□□□□□ -1.53
VSX2P58304 AL354868.1-201ENST00000417077 482 ntBASIC5.49□□□□□ -1.53
VSX2P58304 AC093155.2-201ENST00000420734 937 ntBASIC5.49□□□□□ -1.53
VSX2P58304 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.49□□□□□ -1.53
VSX2P58304 AL590399.2-201ENST00000427536 309 ntBASIC5.49□□□□□ -1.53
VSX2P58304 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.49□□□□□ -1.53
VSX2P58304 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.49□□□□□ -1.53
VSX2P58304 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.49□□□□□ -1.53
VSX2P58304 OR7E116P-201ENST00000448529 957 ntBASIC5.49□□□□□ -1.53
VSX2P58304 PPIAP20-201ENST00000449839 135 ntBASIC5.49□□□□□ -1.53
VSX2P58304 LRRC37A14P-201ENST00000452297 462 ntBASIC5.49□□□□□ -1.53
VSX2P58304 YWHAEP1-201ENST00000453697 763 ntBASIC5.49□□□□□ -1.53
VSX2P58304 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.49□□□□□ -1.53
VSX2P58304 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.49□□□□□ -1.53
VSX2P58304 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.49□□□□□ -1.53
VSX2P58304 AC096996.1-201ENST00000563813 325 ntBASIC5.49□□□□□ -1.53
VSX2P58304 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.49□□□□□ -1.53
VSX2P58304 AC012146.2-201ENST00000576545 416 ntBASIC5.49□□□□□ -1.53
VSX2P58304 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.49□□□□□ -1.53
VSX2P58304 AC126175.1-201ENST00000617041 758 ntBASIC5.49□□□□□ -1.53
VSX2P58304 MIR6729-201ENST00000618194 65 ntBASIC5.49□□□□□ -1.53
VSX2P58304 AL390318.1-201ENST00000624564 687 ntBASIC5.49□□□□□ -1.53
VSX2P58304 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.49□□□□□ -1.53
VSX2P58304 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VSX2P58304 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.49□□□□□ -1.53
VSX2P58304 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.49□□□□□ -1.53
VSX2P58304 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.49□□□□□ -1.53
VSX2P58304 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.49□□□□□ -1.53
VSX2P58304 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VSX2P58304 RPS2P45-201ENST00000469997 2057 ntBASIC5.49□□□□□ -1.53
VSX2P58304 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VSX2P58304 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
VSX2P58304 MFSD8-239ENST00000641590 2479 ntBASIC5.49□□□□□ -1.53
VSX2P58304 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VSX2P58304 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 AC092451.3-201ENST00000625067 1343 ntBASIC5.48□□□□□ -1.53
VSX2P58304 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 AC007842.1-201ENST00000597336 2039 ntBASIC5.48□□□□□ -1.53
VSX2P58304 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms