Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC098483.2-201ENST00000603158 454 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 AC008555.7-201ENST00000605008 583 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 AL022394.1-201ENST00000606979 292 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 AL355802.4-201ENST00000607635 548 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-1P43699 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-1P43699 CASC19-281ENST00000642118 1554 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NKX2-1P43699 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-1P43699 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 SMG1P7-201ENST00000565246 2704 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-1P43699 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
NKX2-1P43699 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NKX2-1P43699 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-1P43699 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-1P43699 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-1P43699 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-1P43699 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-1P43699 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 OR7A2P-201ENST00000304105 930 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC010894.1-201ENST00000313760 361 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NKX2-1P43699 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
NKX2-1P43699 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 AC087752.1-201ENST00000391360 558 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 YWHAZP4-201ENST00000392459 708 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-1P43699 CDC42P6-201ENST00000421246 576 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-1P43699 CRIP1P1-201ENST00000427567 185 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC023141.6-201ENST00000429418 337 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-1P43699 OR6R1P-201ENST00000431838 940 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 HSFY7P-201ENST00000432672 318 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 HSFY8P-201ENST00000437934 318 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-1P43699 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC007000.2-201ENST00000442564 487 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 HSFY5P-201ENST00000453726 309 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 RN7SL197P-201ENST00000466981 299 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 OR7E157P-201ENST00000494376 911 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC021087.2-201ENST00000504656 1203 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 OR7E99P-201ENST00000505750 922 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 AC021146.7-201ENST00000509604 775 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-1P43699 AC027338.1-201ENST00000514840 825 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.88□□□□□ -1.63
NKX2-1P43699 RNA5SP418-201ENST00000515951 117 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NKX2-1P43699 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-1P43699 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.88□□□□□ -1.63
NKX2-1P43699 CHEK2P2-201ENST00000554701 672 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX2-1P43699 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-1P43699 AC068408.1-201ENST00000577406 1144 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX2-1P43699 RPL29P33-201ENST00000587474 316 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-1P43699 SNX6P1-201ENST00000601728 1224 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AL591222.2-201ENST00000604443 754 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AL591167.1-201ENST00000607321 456 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC084824.5-201ENST00000612009 413 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AL512506.1-201ENST00000613918 449 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 MIR6070-201ENST00000613967 103 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC025016.1-201ENST00000616746 682 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
NKX2-1P43699 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
NKX2-1P43699 AC007842.1-201ENST00000597336 2039 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 AC011416.1-201ENST00000514947 1732 ntBASIC4.88□□□□□ -1.63
NKX2-1P43699 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-1P43699 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms