Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCNAP12004 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
PCNAP12004 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCNAP12004 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.82□□□□□ -1.48
PCNAP12004 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCNAP12004 SNORA21-201ENST00000362423 132 ntBASIC5.82□□□□□ -1.48
PCNAP12004 RNU105B-201ENST00000364478 208 ntBASIC5.82□□□□□ -1.48
PCNAP12004 SNORA27.3-201ENST00000364937 134 ntBASIC5.82□□□□□ -1.48
PCNAP12004 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCNAP12004 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PCNAP12004 RN7SKP108-201ENST00000411367 328 ntBASIC5.82□□□□□ -1.48
PCNAP12004 PTCD2P2-201ENST00000415579 1095 ntBASIC5.82□□□□□ -1.48
PCNAP12004 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.82□□□□□ -1.48
PCNAP12004 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.82□□□□□ -1.48
PCNAP12004 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.82□□□□□ -1.48
PCNAP12004 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.82□□□□□ -1.48
PCNAP12004 GAPDHP59-201ENST00000435908 267 ntBASIC5.82□□□□□ -1.48
PCNAP12004 ACA64.4-201ENST00000459070 127 ntBASIC5.82□□□□□ -1.48
PCNAP12004 RN7SL254P-201ENST00000460609 284 ntBASIC5.82□□□□□ -1.48
PCNAP12004 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.82□□□□□ -1.48
PCNAP12004 RPL23AP40-201ENST00000487630 390 ntBASIC5.82□□□□□ -1.48
PCNAP12004 RN7SL362P-201ENST00000494228 267 ntBASIC5.82□□□□□ -1.48
PCNAP12004 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.82□□□□□ -1.48
PCNAP12004 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.82□□□□□ -1.48
PCNAP12004 CR383658.1-201ENST00000514609 734 ntBASIC5.82□□□□□ -1.48
PCNAP12004 RNA5SP434-201ENST00000516647 121 ntBASIC5.82□□□□□ -1.48
PCNAP12004 SEC11B-201ENST00000518383 499 ntBASIC5.82□□□□□ -1.48
PCNAP12004 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.82□□□□□ -1.48
PCNAP12004 AL136520.1-202ENST00000555494 763 ntBASIC5.82□□□□□ -1.48
PCNAP12004 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.82□□□□□ -1.48
PCNAP12004 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.82□□□□□ -1.48
PCNAP12004 LINC00557-201ENST00000563184 1279 ntBASIC5.82□□□□□ -1.48
PCNAP12004 AC007346.1-201ENST00000569208 867 ntBASIC5.82□□□□□ -1.48
PCNAP12004 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.82□□□□□ -1.48
PCNAP12004 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.82□□□□□ -1.48
PCNAP12004 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.82□□□□□ -1.48
PCNAP12004 AL645933.2-201ENST00000606743 1207 ntBASIC5.82□□□□□ -1.48
PCNAP12004 AL080312.2-201ENST00000613001 630 ntBASIC5.82□□□□□ -1.48
PCNAP12004 MIR6721-201ENST00000617181 87 ntBASIC5.82□□□□□ -1.48
PCNAP12004 AL357140.4-201ENST00000636827 412 ntBASIC5.82□□□□□ -1.48
PCNAP12004 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PCNAP12004 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCNAP12004 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PCNAP12004 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.82□□□□□ -1.48
PCNAP12004 AL161756.3-201ENST00000641216 2071 ntBASIC5.82□□□□□ -1.48
PCNAP12004 AL355488.2-201ENST00000609909 2850 ntBASIC5.82□□□□□ -1.48
PCNAP12004 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCNAP12004 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCNAP12004 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.82□□□□□ -1.48
PCNAP12004 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PCNAP12004 AC026523.2-201ENST00000625039 7739 ntBASIC5.82□□□□□ -1.48
PCNAP12004 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PCNAP12004 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PCNAP12004 KYNUP3-201ENST00000574386 1341 ntBASIC5.81□□□□□ -1.48
PCNAP12004 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.81□□□□□ -1.48
PCNAP12004 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PCNAP12004 AC068446.1-201ENST00000556425 1549 ntBASIC5.81□□□□□ -1.48
PCNAP12004 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.81□□□□□ -1.48
PCNAP12004 RNA5SP110-201ENST00000362638 115 ntBASIC5.81□□□□□ -1.48
PCNAP12004 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 SNRPEP6-201ENST00000407465 277 ntBASIC5.81□□□□□ -1.48
PCNAP12004 RNA5SP198-201ENST00000410376 127 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.81□□□□□ -1.48
PCNAP12004 AL035422.1-201ENST00000414193 397 ntBASIC5.81□□□□□ -1.48
PCNAP12004 RAB9AP4-201ENST00000415230 609 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AL359885.1-201ENST00000415786 903 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.81□□□□□ -1.48
PCNAP12004 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.81□□□□□ -1.48
PCNAP12004 AC130360.1-201ENST00000425489 1117 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AC017019.1-201ENST00000426129 261 ntBASIC5.81□□□□□ -1.48
PCNAP12004 RPL12P16-201ENST00000431098 498 ntBASIC5.81□□□□□ -1.48
PCNAP12004 TXNP2-201ENST00000443918 295 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.81□□□□□ -1.48
PCNAP12004 NPM1P19-201ENST00000450070 712 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AC016027.4-201ENST00000450866 277 ntBASIC5.81□□□□□ -1.48
PCNAP12004 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.81□□□□□ -1.48
PCNAP12004 AC083795.1-201ENST00000491760 320 ntBASIC5.81□□□□□ -1.48
PCNAP12004 RN7SL568P-201ENST00000493069 298 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.81□□□□□ -1.48
PCNAP12004 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.81□□□□□ -1.48
PCNAP12004 AC009879.1-201ENST00000520029 839 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AC130365.2-201ENST00000525882 1201 ntBASIC5.81□□□□□ -1.48
PCNAP12004 OR7E10P-201ENST00000526420 991 ntBASIC5.81□□□□□ -1.48
PCNAP12004 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 AC006518.1-201ENST00000541449 943 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.81□□□□□ -1.48
PCNAP12004 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.81□□□□□ -1.48
PCNAP12004 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.81□□□□□ -1.48
PCNAP12004 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.81□□□□□ -1.48
PCNAP12004 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.81□□□□□ -1.48
PCNAP12004 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.81□□□□□ -1.48
PCNAP12004 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms