Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AL031985.1-201ENST00000392713 418 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 OR2AT2P-201ENST00000413438 905 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 BMS1P17-202ENST00000416720 316 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AC007161.1-204ENST00000423039 460 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AL133173.1-201ENST00000423458 397 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 LINC02210-201ENST00000444561 288 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 HMGN1P36-201ENST00000446623 298 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AL450023.1-201ENST00000450868 751 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 GLUD1P3-202ENST00000508551 200 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AC111000.6-201ENST00000514471 709 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AC005618.4-201ENST00000625053 554 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 MT-RNR2-201ENST00000387347 1559 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AP002512.4-202ENST00000641599 4530 ntBASIC5.66□□□□□ -1.5
HLA-DQB2P05538 AP002833.3-201ENST00000625075 2265 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AL162456.1-201ENST00000634535 2006 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 TMSB4XP4-201ENST00000323496 618 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 OR6E1P-201ENST00000414424 923 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 OR6D1P-201ENST00000436165 939 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AC002504.1-201ENST00000438281 691 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AL450996.1-201ENST00000445574 1202 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AC128716.1-201ENST00000475129 166 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AC112191.2-201ENST00000522428 333 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AL049872.1-201ENST00000556323 322 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 MIR3614-201ENST00000581261 86 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 AC008115.3-201ENST00000614874 549 ntBASIC5.65□□□□□ -1.5
HLA-DQB2P05538 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DQB2P05538 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.65□□□□□ -1.51
HLA-DQB2P05538 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DQB2P05538 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.65□□□□□ -1.51
HLA-DQB2P05538 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HLA-DQB2P05538 AC025470.1-201ENST00000510053 2032 ntBASIC5.65□□□□□ -1.51
HLA-DQB2P05538 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.65□□□□□ -1.51
HLA-DQB2P05538 AC087516.1-201ENST00000561236 2428 ntBASIC5.65□□□□□ -1.51
HLA-DQB2P05538 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
HLA-DQB2P05538 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DQB2P05538 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DQB2P05538 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 AL354868.1-201ENST00000417077 482 ntBASIC5.64□□□□□ -1.51
HLA-DQB2P05538 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 RPL31P15-201ENST00000449770 338 ntBASIC5.64□□□□□ -1.51
HLA-DQB2P05538 AZGP1P2-201ENST00000454506 345 ntBASIC5.64□□□□□ -1.51
HLA-DQB2P05538 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 H3F3BP2-201ENST00000583907 357 ntBASIC5.64□□□□□ -1.51
HLA-DQB2P05538 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 AC127024.6-201ENST00000621598 424 ntBASIC5.64□□□□□ -1.51
HLA-DQB2P05538 CU639417.4-201ENST00000623928 207 ntBASIC5.64□□□□□ -1.51
HLA-DQB2P05538 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 LINC01963-201ENST00000562038 3148 ntBASIC5.64□□□□□ -1.51
HLA-DQB2P05538 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DQB2P05538 MAPK10-261ENST00000641050 3109 ntBASIC5.63□□□□□ -1.51
HLA-DQB2P05538 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms