Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 RN7SKP185-201ENST00000362813 326 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 RN7SKP145-201ENST00000363291 303 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 RPS14P4-201ENST00000415880 418 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AC069154.1-201ENST00000432914 542 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AC023141.8-201ENST00000442554 208 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 RN7SL168P-201ENST00000463821 279 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AL122020.1-201ENST00000472287 459 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AP002884.1-201ENST00000479691 655 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 RN7SL170P-201ENST00000487098 295 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 MIR2117-201ENST00000516780 80 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AC107958.1-201ENST00000556576 290 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 MIR4271-201ENST00000582451 67 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AC022400.9-201ENST00000623633 273 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 GVINP1-202ENST00000531871 7271 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 AL449283.1-201ENST00000602631 3403 ntBASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DRB4X5D2U9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 RNFT1P3-201ENST00000340898 1052 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 RN7SKP77-201ENST00000363261 353 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 RPL11P3-201ENST00000395256 523 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AL096711.1-201ENST00000404780 554 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AC099535.1-201ENST00000408928 371 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 GNG5P5-201ENST00000420444 220 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 BX284632.2-201ENST00000421091 399 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 DEFA9P-201ENST00000433042 285 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AL512605.1-202ENST00000441919 381 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AL359955.2-201ENST00000445380 353 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 NPM1P19-201ENST00000450070 712 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 RSU1P1-201ENST00000453416 441 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 OR7E157P-201ENST00000494376 911 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 RPSAP51-201ENST00000497462 645 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 GOLGA5P1-201ENST00000507317 980 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 Vault.2-201ENST00000516519 98 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 RNA5SP340-201ENST00000517132 107 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AC024405.1-201ENST00000532521 1042 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AC129778.1-202ENST00000623812 261 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AL591379.1-207ENST00000635982 261 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 FBXL21-201ENST00000297158 1305 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms