Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CR383656.1-201ENST00000484916 377 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 RNA5SP271-201ENST00000516700 88 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 OR4A17P-201ENST00000526032 904 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 AC005363.1-201ENST00000530779 351 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 HMGB1P42-201ENST00000532126 553 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 NANOGNBP2-201ENST00000544753 553 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 AC007938.2-201ENST00000604666 2634 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 CASC19-260ENST00000641828 2001 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 NEPNP-201ENST00000404786 1371 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 MRE11P1-201ENST00000464884 2127 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 CDY3P-201ENST00000454543 1618 ntBASIC5.63□□□□□ -1.51
TREX1Q9NSU2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.63□□□□□ -1.51
TREX1Q9NSU2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC116158.1-201ENST00000560231 2129 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC016745.2-201ENST00000608834 3443 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC140134.1-201ENST00000511830 3544 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC107977.1-201ENST00000355745 939 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 MIR375-201ENST00000362103 64 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 RPS3AP2-201ENST00000407190 754 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 RN7SKP240-201ENST00000410583 375 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC006335.2-201ENST00000437993 330 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 MED28P3-201ENST00000444288 531 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AZGP1P2-201ENST00000454506 345 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC006499.4-201ENST00000510947 694 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 MIR6071-201ENST00000616741 78 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 MIR6133-201ENST00000617057 108 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AP005431.1-201ENST00000618479 319 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC104964.3-201ENST00000606115 2860 ntBASIC5.62□□□□□ -1.51
TREX1Q9NSU2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TREX1Q9NSU2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 RN7SKP145-201ENST00000363291 303 ntBASIC5.61□□□□□ -1.51
TREX1Q9NSU2 RNA5SP131-201ENST00000365452 119 ntBASIC5.61□□□□□ -1.51
TREX1Q9NSU2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 LYPLA1P3-201ENST00000402650 695 ntBASIC5.61□□□□□ -1.51
TREX1Q9NSU2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 AC007161.1-204ENST00000423039 460 ntBASIC5.61□□□□□ -1.51
TREX1Q9NSU2 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 RIMKLBP2-201ENST00000424737 654 ntBASIC5.61□□□□□ -1.51
TREX1Q9NSU2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 AL161722.1-201ENST00000446972 1032 ntBASIC5.61□□□□□ -1.51
TREX1Q9NSU2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.61□□□□□ -1.51
TREX1Q9NSU2 AC026782.2-201ENST00000510845 636 ntBASIC5.61□□□□□ -1.51
TREX1Q9NSU2 SEPT10P1-201ENST00000517342 1162 ntBASIC5.61□□□□□ -1.51
TREX1Q9NSU2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms