Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RPL7P8-201ENST00000411964 730 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 RPL26P37-201ENST00000411983 438 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SSU72Q9NP77 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 CICP10-201ENST00000439497 198 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC005297.1-201ENST00000444765 862 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 COX6CP2-201ENST00000444980 225 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC023271.1-201ENST00000445936 1090 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 UBE2V1P7-201ENST00000446395 340 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AL139156.3-201ENST00000454802 394 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 EIF3LP2-201ENST00000457262 807 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 RPS20P4-201ENST00000461659 355 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 RN7SL152P-201ENST00000484176 298 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 ACTG1P20-201ENST00000486001 468 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 RPL17P2-201ENST00000491913 451 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 EIF4E2P2-201ENST00000492033 736 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 SNORA58-201ENST00000505219 137 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 snoZ278.1-201ENST00000517059 112 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC106038.2-201ENST00000520706 568 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC084757.1-201ENST00000559987 490 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC012417.1-201ENST00000582307 1039 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC011497.2-201ENST00000600255 639 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 OR7E94P-202ENST00000601375 790 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 RPS28P1-201ENST00000604589 187 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 MIR6751-201ENST00000610479 63 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC023310.4-201ENST00000613130 650 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC245407.2-201ENST00000614199 451 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC026368.1-201ENST00000614934 690 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC073569.3-201ENST00000619055 682 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC015722.2-201ENST00000622210 551 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSU72Q9NP77 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AL356361.1-201ENST00000400943 1459 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AC000367.1-201ENST00000452711 1766 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 AL359263.1-201ENST00000441188 2796 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SSU72Q9NP77 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.89□□□□□ -1.31
SSU72Q9NP77 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSU72Q9NP77 DOCK11P1-201ENST00000553480 5932 ntBASIC6.89□□□□□ -1.31
SSU72Q9NP77 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC096992.2-201ENST00000609553 1684 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 IL6STP1-201ENST00000346911 1020 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 RNU2-66P-201ENST00000410650 161 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC007899.1-201ENST00000412776 775 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC009784.1-201ENST00000426484 460 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 MGAT2P2-201ENST00000427194 797 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC104651.1-201ENST00000427559 735 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC068137.1-201ENST00000429272 584 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms