Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FO681491.1-202ENST00000623392 737 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL21A1Q96P44 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL21A1Q96P44 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL21A1Q96P44 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL21A1Q96P44 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL21A1Q96P44 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 AC099654.3-201ENST00000447087 1546 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 AC125336.1-201ENST00000508893 2827 ntBASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 MFSD8-239ENST00000641590 2479 ntBASIC5.42□□□□□ -1.54
COL21A1Q96P44 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 MFSD8-219ENST00000641228 2559 ntBASIC5.42□□□□□ -1.54
COL21A1Q96P44 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 TMSB4XP2-201ENST00000335179 210 ntBASIC5.42□□□□□ -1.54
COL21A1Q96P44 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 RN7SKP279-201ENST00000411383 298 ntBASIC5.42□□□□□ -1.54
COL21A1Q96P44 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC242426.1-201ENST00000435270 960 ntBASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 NDUFS5P5-201ENST00000437256 321 ntBASIC5.42□□□□□ -1.54
COL21A1Q96P44 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AL356801.1-201ENST00000559320 294 ntBASIC5.42□□□□□ -1.54
COL21A1Q96P44 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC027216.1-201ENST00000577726 685 ntBASIC5.42□□□□□ -1.54
COL21A1Q96P44 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
COL21A1Q96P44 PDZK1P1-202ENST00000425209 1350 ntBASIC5.42□□□□□ -1.54
COL21A1Q96P44 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL21A1Q96P44 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 LINC02019-201ENST00000608605 2060 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 RN7SKP69-201ENST00000365390 305 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 RNA5SP91-201ENST00000390902 119 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 AL035660.1-201ENST00000422041 222 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC126120.1-201ENST00000431082 470 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 DEFA9P-201ENST00000433042 285 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 EIF5AP4-201ENST00000441206 465 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC015983.1-201ENST00000441577 373 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AL157777.1-201ENST00000468100 304 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 NDUFA5P5-201ENST00000468361 342 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms