Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf72Q96LT7 AC012254.3-201ENST00000591183 2117 ntBASIC5.89□□□□□ -1.47
C9orf72Q96LT7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf72Q96LT7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf72Q96LT7 AC016745.2-201ENST00000608834 3443 ntBASIC5.89□□□□□ -1.47
C9orf72Q96LT7 UGT2B24P-201ENST00000514441 1597 ntBASIC5.89□□□□□ -1.47
C9orf72Q96LT7 XKRY2-202ENST00000623874 1581 ntBASIC5.89□□□□□ -1.47
C9orf72Q96LT7 XKRY-202ENST00000624960 1581 ntBASIC5.89□□□□□ -1.47
C9orf72Q96LT7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 SELENOWP1-201ENST00000322792 252 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 RN7SKP145-201ENST00000363291 303 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 RNGTTP1-201ENST00000420965 728 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 VN1R21P-201ENST00000426703 765 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 ACA64.1-201ENST00000459171 127 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 Y_RNA.667-201ENST00000516212 107 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 SCARNA18.1-201ENST00000516330 83 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 RNA5SP438-201ENST00000516561 112 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AC100767.2-201ENST00000604840 693 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AC145423.1-201ENST00000605712 336 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AC026124.2-201ENST00000621847 656 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 AC008691.1-209ENST00000642094 814 ntBASIC5.88□□□□□ -1.47
C9orf72Q96LT7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf72Q96LT7 PARP4P2-201ENST00000446672 3326 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AL161912.4-201ENST00000623889 2468 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 RNA5SP510-201ENST00000364697 99 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 KIF4CP-201ENST00000422742 1279 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 NAP1L4P2-201ENST00000425958 899 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 RPS27AP6-201ENST00000427962 448 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 NPM1P18-201ENST00000434232 732 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 BMS1P10-201ENST00000443754 1120 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AC108751.3-201ENST00000461814 1020 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AC068305.2-201ENST00000550567 1205 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AC005244.1-201ENST00000582566 339 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AC007786.3-201ENST00000615154 596 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 MIR6133-201ENST00000617057 108 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 AL136228.1-201ENST00000622221 319 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 Z95114.1-201ENST00000624264 14574 ntBASIC5.87□□□□□ -1.47
C9orf72Q96LT7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf72Q96LT7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
C9orf72Q96LT7 AC009962.1-201ENST00000567327 3813 ntBASIC5.86□□□□□ -1.47
C9orf72Q96LT7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf72Q96LT7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.86□□□□□ -1.47
C9orf72Q96LT7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.86□□□□□ -1.47
C9orf72Q96LT7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf72Q96LT7 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf72Q96LT7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.86□□□□□ -1.47
C9orf72Q96LT7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf72Q96LT7 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.86□□□□□ -1.47
C9orf72Q96LT7 SNORA70.6-201ENST00000383934 134 ntBASIC5.86□□□□□ -1.47
C9orf72Q96LT7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf72Q96LT7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.86□□□□□ -1.47
C9orf72Q96LT7 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms