Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 RNA5SP435-201ENST00000364044 108 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 RN7SKP69-201ENST00000365390 305 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 RN7SKP81-201ENST00000365603 331 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 SEPT7P2-202ENST00000398921 823 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AL512422.1-201ENST00000407033 553 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 RNA5SP178-201ENST00000410380 128 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 RPL12P39-201ENST00000455456 496 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AC074087.1-201ENST00000512059 724 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AC027544.3-201ENST00000535082 757 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AC016839.1-201ENST00000578162 867 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 AC083837.1-201ENST00000565297 2994 ntBASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 LINC02019-201ENST00000608605 2060 ntBASIC5.71□□□□□ -1.49
ECHDC3Q96DC8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ECHDC3Q96DC8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ECHDC3Q96DC8 AL591135.1-201ENST00000401578 5914 ntBASIC5.71□□□□□ -1.49
ECHDC3Q96DC8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.71□□□□□ -1.49
ECHDC3Q96DC8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
ECHDC3Q96DC8 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 RPL11P3-201ENST00000395256 523 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 RNGTTP1-201ENST00000420965 728 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC023141.9-201ENST00000458734 412 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 RPS7P6-201ENST00000485777 579 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC012123.2-201ENST00000485809 248 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 RN7SL101P-201ENST00000496350 279 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC104109.1-201ENST00000498563 436 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 NRBF2P4-201ENST00000520874 850 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC112191.2-201ENST00000522428 333 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC139697.1-201ENST00000548429 745 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AGGF1P7-201ENST00000562369 913 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC012146.2-201ENST00000576545 416 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 FAM72A-208ENST00000607379 1139 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AL138960.1-201ENST00000613838 513 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC008691.1-209ENST00000642094 814 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AL158152.1-201ENST00000602652 1435 ntBASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ECHDC3Q96DC8 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 YES1P1-201ENST00000418510 1628 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms