Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AL121776.1-201ENST00000429337 372 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 ZNF965P-201ENST00000432501 817 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AL158053.1-201ENST00000441503 453 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AP000281.1-201ENST00000444036 316 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 BUD31P2-201ENST00000449374 300 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 GEMIN2P1-201ENST00000454246 752 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 CABYRP1-201ENST00000465493 1045 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 RN7SL269P-201ENST00000467795 305 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC114728.1-201ENST00000488289 483 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 RNA5SP362-201ENST00000516048 118 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 OR56A7P-201ENST00000524865 941 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 RPA2P3-201ENST00000533268 770 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC073916.1-201ENST00000545095 130 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 MIR5095-201ENST00000578844 88 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 MIR4443-201ENST00000585052 53 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC026790.2-201ENST00000606282 430 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC141002.1-201ENST00000607025 279 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AL136131.3-201ENST00000607600 188 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AL592494.3-201ENST00000609485 464 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC096861.1-201ENST00000616652 240 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC063952.1-203ENST00000634410 658 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AP002370.1-201ENST00000528055 1602 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC009501.3-201ENST00000605001 1352 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 SUMO2P3-201ENST00000438311 288 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC007000.2-201ENST00000442564 487 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 SUMO2P1-206ENST00000445436 284 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 CCRL1P1-201ENST00000449542 1053 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC104629.2-201ENST00000468627 598 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC068522.1-201ENST00000482895 345 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC093663.2-201ENST00000484625 313 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC083795.1-201ENST00000491760 320 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 SNORA70.20-201ENST00000516848 126 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 IGHV1-14-201ENST00000523391 241 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC022404.1-201ENST00000555320 273 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AC093524.1-201ENST00000564266 1094 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 RNU4ATAC-201ENST00000580972 127 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 QTRT1P1-201ENST00000604344 1078 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 AP000641.1-201ENST00000531988 1639 ntBASIC6.09□□□□□ -1.43
HMGB4Q8WW32 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HMGB4Q8WW32 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.09□□□□□ -1.44
HMGB4Q8WW32 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.09□□□□□ -1.44
HMGB4Q8WW32 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HMGB4Q8WW32 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms