Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MRPS5P3-201ENST00000515577 166 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 MTND5P21-201ENST00000531961 522 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 NPIPB14P-203ENST00000532298 987 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 MTND1P8-201ENST00000571424 950 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 TXNP4-201ENST00000575018 310 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AL135999.3-201ENST00000610501 812 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AC022960.3-201ENST00000619794 441 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AC090506.2-201ENST00000624521 419 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AC006484.1-201ENST00000435086 1884 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AL161756.3-201ENST00000641216 2071 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 CASC19-255ENST00000641733 1385 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 MTND4P9-201ENST00000507819 1346 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 MRRFP1-201ENST00000435941 1675 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC005005.4-201ENST00000623789 16698 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 OR10R3P-201ENST00000361688 942 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 MIR188-201ENST00000385034 86 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 MIR620-201ENST00000385232 95 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AL035422.1-201ENST00000414193 397 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 Z82198.3-201ENST00000421145 199 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 RPL5P25-201ENST00000441148 775 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 RNF2P1-201ENST00000442955 1010 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 OR7E22P-201ENST00000478335 1035 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 TRBV5-2-201ENST00000489095 273 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC106822.1-201ENST00000502647 526 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 ST13P12-201ENST00000508958 1094 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 HMGN1P15-201ENST00000513870 295 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 RN7SKP288-201ENST00000516227 268 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC011270.1-201ENST00000558606 583 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 MT1CP-201ENST00000567054 174 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 PPATP2-201ENST00000605635 508 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 AC139426.3-201ENST00000605648 2059 ntBASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP4Q8N3C7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC005224.3-201ENST00000584683 2140 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 SNORA72.3-201ENST00000365074 132 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 MIR191-201ENST00000384873 92 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 RBBP4P5-201ENST00000398583 1266 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AL132875.1-201ENST00000403623 949 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 MYL6P5-201ENST00000412707 459 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC245096.1-201ENST00000413104 546 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 MTND4P11-201ENST00000417020 1058 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 RPS7P8-201ENST00000418311 581 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms