Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.3□□□□□ -1.56
RFX4Q33E94 AC093849.1-201ENST00000563631 2209 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AC079097.1-201ENST00000512187 1399 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX4Q33E94 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RFX4Q33E94 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFX4Q33E94 AC144833.1-201ENST00000567953 4089 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX4Q33E94 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX4Q33E94 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX4Q33E94 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AL035422.1-201ENST00000414193 397 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX4Q33E94 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 NDUFB4P8-201ENST00000435351 367 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX4Q33E94 NPM1P19-201ENST00000450070 712 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 RN7SL188P-201ENST00000469842 285 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 RPS27P20-201ENST00000492051 246 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 ENPP7P11-201ENST00000505915 627 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 GUSBP9-201ENST00000510138 584 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 HMGN1P17-201ENST00000513734 295 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 MAST4-IT1-201ENST00000514241 658 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 AP001000.1-201ENST00000526843 742 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AC122688.1-201ENST00000541494 223 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 AC139697.1-201ENST00000548429 745 ntBASIC5.29□□□□□ -1.56
RFX4Q33E94 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX4Q33E94 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX4Q33E94 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX4Q33E94 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX4Q33E94 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX4Q33E94 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX4Q33E94 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX4Q33E94 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX4Q33E94 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX4Q33E94 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFX4Q33E94 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC011755.1-201ENST00000623763 2049 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX4Q33E94 ICE2P1-201ENST00000512800 1849 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX4Q33E94 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC104623.2-202ENST00000623477 4002 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX4Q33E94 SELENOWP1-201ENST00000322792 252 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 RN7SKP77-201ENST00000363261 353 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX4Q33E94 RPL35AP3-201ENST00000414680 288 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX4Q33E94 RPSAP32-201ENST00000432681 526 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC023141.3-201ENST00000436698 278 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFX4Q33E94 GAPDHP14-201ENST00000450472 937 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX4Q33E94 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX4Q33E94 RPS23P2-201ENST00000463671 415 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 AC092865.4-201ENST00000477936 615 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 RPL29P23-201ENST00000486188 442 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC021193.1-201ENST00000511607 420 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 RNU6-964P-201ENST00000516524 69 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX4Q33E94 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.28□□□□□ -1.56
RFX4Q33E94 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX4Q33E94 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC106730.2-201ENST00000566641 540 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX4Q33E94 MIR5010-201ENST00000582846 120 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 AC107993.1-201ENST00000591343 684 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms