Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC087360.1-201ENST00000518788 616 ntBASIC6.63□□□□□ -1.35
NEDD4P46934 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.63□□□□□ -1.35
NEDD4P46934 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.63□□□□□ -1.35
NEDD4P46934 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.63□□□□□ -1.35
NEDD4P46934 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.63□□□□□ -1.35
NEDD4P46934 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.63□□□□□ -1.35
NEDD4P46934 MIR1273E-201ENST00000581165 102 ntBASIC6.63□□□□□ -1.35
NEDD4P46934 MIR4505-201ENST00000582238 73 ntBASIC6.63□□□□□ -1.35
NEDD4P46934 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.63□□□□□ -1.35
NEDD4P46934 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.63□□□□□ -1.35
NEDD4P46934 AL353729.2-201ENST00000605859 1249 ntBASIC6.63□□□□□ -1.35
NEDD4P46934 FAM72A-208ENST00000607379 1139 ntBASIC6.63□□□□□ -1.35
NEDD4P46934 AC008115.3-201ENST00000614874 549 ntBASIC6.63□□□□□ -1.35
NEDD4P46934 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.63□□□□□ -1.35
NEDD4P46934 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.63□□□□□ -1.35
NEDD4P46934 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEDD4P46934 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEDD4P46934 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NEDD4P46934 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.63□□□□□ -1.35
NEDD4P46934 AL049634.1-201ENST00000453770 1720 ntBASIC6.63□□□□□ -1.35
NEDD4P46934 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
NEDD4P46934 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.63□□□□□ -1.35
NEDD4P46934 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NEDD4P46934 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEDD4P46934 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NEDD4P46934 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
NEDD4P46934 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.63□□□□□ -1.35
NEDD4P46934 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD4P46934 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD4P46934 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD4P46934 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
NEDD4P46934 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD4P46934 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD4P46934 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
NEDD4P46934 AL158152.1-201ENST00000602652 1435 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD4P46934 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD4P46934 AL121886.1-201ENST00000358609 435 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 RNA5SP234-201ENST00000363916 119 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NEDD4P46934 SDHDP6-201ENST00000414693 480 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 METTL15P3-201ENST00000415522 1221 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD4P46934 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.62□□□□□ -1.35
NEDD4P46934 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.62□□□□□ -1.35
NEDD4P46934 OR6D1P-201ENST00000436165 939 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 AL390119.1-201ENST00000440329 312 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.62□□□□□ -1.35
NEDD4P46934 AC019185.1-201ENST00000442718 389 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 RN7SL583P-201ENST00000475692 287 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 RPS17P5-201ENST00000498293 408 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 RN7SKP253-201ENST00000516424 309 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD4P46934 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.62□□□□□ -1.35
NEDD4P46934 AL049872.1-201ENST00000556323 322 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD4P46934 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD4P46934 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
NEDD4P46934 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.62□□□□□ -1.35
NEDD4P46934 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD4P46934 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
NEDD4P46934 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NEDD4P46934 AC140134.1-201ENST00000511830 3544 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 AC004076.2-201ENST00000620532 3323 ntBASIC6.62□□□□□ -1.35
NEDD4P46934 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NEDD4P46934 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.61□□□□□ -1.35
NEDD4P46934 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
NEDD4P46934 HSPD1P7-201ENST00000447985 1686 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 AC018809.2-201ENST00000602436 3823 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NEDD4P46934 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NEDD4P46934 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEDD4P46934 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.61□□□□□ -1.35
NEDD4P46934 RNA5SP514-201ENST00000363717 111 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 RNU11-201ENST00000387069 134 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 RPS21P8-201ENST00000413365 247 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.61□□□□□ -1.35
NEDD4P46934 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEDD4P46934 TMEM183AP1-205ENST00000432739 290 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NEDD4P46934 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.61□□□□□ -1.35
NEDD4P46934 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.61□□□□□ -1.35
NEDD4P46934 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.61□□□□□ -1.35
NEDD4P46934 AL360012.1-201ENST00000602813 131 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 FO393422.1-201ENST00000603908 708 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 AC015712.7-201ENST00000615211 635 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.61□□□□□ -1.35
NEDD4P46934 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NEDD4P46934 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NEDD4P46934 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEDD4P46934 UGT2B24P-201ENST00000514441 1597 ntBASIC6.61□□□□□ -1.35
NEDD4P46934 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEDD4P46934 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEDD4P46934 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NEDD4P46934 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEDD4P46934 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.6□□□□□ -1.35
NEDD4P46934 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEDD4P46934 RN7SKP17-201ENST00000411242 351 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms