Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 HMGB1P3-201ENST00000502802 616 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 AC018645.1-201ENST00000505003 109 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 MTND3P3-201ENST00000505004 126 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 AC026782.2-201ENST00000510845 636 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC078899.1-201ENST00000521432 1185 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX2-1P43699 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AL391001.1-201ENST00000602747 715 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 AL671309.1-201ENST00000603750 544 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 AC015849.2-201ENST00000605738 409 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 AL133481.2-203ENST00000607558 139 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 AL096803.3-201ENST00000609032 532 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 CR589904.2-201ENST00000612533 440 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 AL355974.3-201ENST00000617383 467 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NKX2-1P43699 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX2-1P43699 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-1P43699 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-1P43699 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX2-1P43699 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC007342.7-201ENST00000624610 2337 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
NKX2-1P43699 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-1P43699 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
NKX2-1P43699 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-1P43699 AC110792.3-201ENST00000595906 1614 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NKX2-1P43699 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
NKX2-1P43699 AP005435.3-201ENST00000531260 3198 ntBASIC4.9□□□□□ -1.63
NKX2-1P43699 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC022325.1-201ENST00000502748 2199 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AL161912.4-201ENST00000623889 2468 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC004023.1-201ENST00000561473 1744 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC130304.1-201ENST00000622942 2385 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NKX2-1P43699 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AL034403.1-201ENST00000399414 885 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-1P43699 EMC3-AS1-205ENST00000438698 534 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 ARAFP2-201ENST00000440565 559 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 COL11A2P1-205ENST00000441798 676 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 XKRY2-201ENST00000442362 1093 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-1P43699 FRG2FP-204ENST00000453982 852 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 CYCSP53-201ENST00000455540 265 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 MTND2P39-201ENST00000457230 764 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC090602.1-201ENST00000469695 252 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 RN7SL836P-201ENST00000476140 296 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 RN7SL70P-201ENST00000478322 302 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-1P43699 RPL5P33-201ENST00000487833 905 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-1P43699 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
NKX2-1P43699 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-1P43699 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC093816.1-201ENST00000515076 913 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 Y_RNA.710-201ENST00000516975 110 ntBASIC4.89□□□□□ -1.63
NKX2-1P43699 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-1P43699 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-1P43699 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms