Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL8A2P25067 RNU1-59P-201ENST00000364829 162 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
COL8A2P25067 MIR143-201ENST00000385300 106 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 OR3A2-201ENST00000408891 1076 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.82□□□□□ -1.64
COL8A2P25067 AL596448.1-201ENST00000415024 392 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.82□□□□□ -1.64
COL8A2P25067 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.82□□□□□ -1.64
COL8A2P25067 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.82□□□□□ -1.64
COL8A2P25067 FMO7P-201ENST00000436045 768 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 AL450996.1-201ENST00000445574 1202 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.82□□□□□ -1.64
COL8A2P25067 AC004129.2-201ENST00000457229 287 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.82□□□□□ -1.64
COL8A2P25067 AC074386.1-201ENST00000476560 767 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.82□□□□□ -1.64
COL8A2P25067 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL8A2P25067 DUTP7-201ENST00000507982 486 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 AC074255.1-201ENST00000511259 501 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
COL8A2P25067 ATP5LP3-201ENST00000514223 304 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.82□□□□□ -1.64
COL8A2P25067 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL8A2P25067 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.82□□□□□ -1.64
COL8A2P25067 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.82□□□□□ -1.64
COL8A2P25067 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC4.82□□□□□ -1.64
COL8A2P25067 DPPA3P2-202ENST00000557188 1219 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.82□□□□□ -1.64
COL8A2P25067 MIR4489-201ENST00000578869 62 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.82□□□□□ -1.64
COL8A2P25067 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.82□□□□□ -1.64
COL8A2P25067 AL512624.1-201ENST00000613638 469 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 U1.25-201ENST00000614085 162 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 U1.34-201ENST00000618578 162 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 U1.31-201ENST00000620022 160 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 AC069234.4-201ENST00000621276 412 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL8A2P25067 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
COL8A2P25067 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL8A2P25067 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL8A2P25067 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL8A2P25067 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
COL8A2P25067 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.82□□□□□ -1.64
COL8A2P25067 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL8A2P25067 AC005224.3-201ENST00000584683 2140 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 LINC02019-201ENST00000608605 2060 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.82□□□□□ -1.64
COL8A2P25067 MFSD8-239ENST00000641590 2479 ntBASIC4.82□□□□□ -1.64
COL8A2P25067 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
COL8A2P25067 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL8A2P25067 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
COL8A2P25067 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.82□□□□□ -1.64
COL8A2P25067 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
COL8A2P25067 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL8A2P25067 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL8A2P25067 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL8A2P25067 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.81□□□□□ -1.64
COL8A2P25067 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.81□□□□□ -1.64
COL8A2P25067 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL8A2P25067 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL8A2P25067 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL8A2P25067 AC027279.4-201ENST00000624371 2072 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL8A2P25067 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL8A2P25067 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL8A2P25067 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
COL8A2P25067 SNORD1C-201ENST00000363315 78 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 RN7SKP124-201ENST00000364730 341 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 RNA5SP131-201ENST00000365452 119 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 OR5W1P-201ENST00000423705 938 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.81□□□□□ -1.64
COL8A2P25067 AC021876.1-201ENST00000425959 359 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.81□□□□□ -1.64
COL8A2P25067 AC012075.1-201ENST00000436549 580 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 CYCSP51-201ENST00000443545 318 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.81□□□□□ -1.64
COL8A2P25067 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 AP000547.1-201ENST00000454360 617 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 snoU13.29-201ENST00000459370 104 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.81□□□□□ -1.64
COL8A2P25067 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.81□□□□□ -1.64
COL8A2P25067 AC073610.1-201ENST00000489971 396 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.81□□□□□ -1.64
COL8A2P25067 OR51A1P-201ENST00000511110 946 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.81□□□□□ -1.64
COL8A2P25067 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.81□□□□□ -1.64
COL8A2P25067 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.81□□□□□ -1.64
COL8A2P25067 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.81□□□□□ -1.64
COL8A2P25067 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.81□□□□□ -1.64
COL8A2P25067 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.81□□□□□ -1.64
COL8A2P25067 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.81□□□□□ -1.64
COL8A2P25067 MIR1273E-201ENST00000581165 102 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 MIR3176-201ENST00000582210 90 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms