Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AP004609.2-201ENST00000532177 190 ntBASIC6.43□□□□□ -1.38
BDNFP23560 AC074029.2-201ENST00000551045 634 ntBASIC6.43□□□□□ -1.38
BDNFP23560 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.43□□□□□ -1.38
BDNFP23560 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.43□□□□□ -1.38
BDNFP23560 MIR4301-201ENST00000577203 66 ntBASIC6.43□□□□□ -1.38
BDNFP23560 MIR4310-201ENST00000582950 57 ntBASIC6.43□□□□□ -1.38
BDNFP23560 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.43□□□□□ -1.38
BDNFP23560 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.43□□□□□ -1.38
BDNFP23560 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
BDNFP23560 AL137072.1-201ENST00000603444 466 ntBASIC6.43□□□□□ -1.38
BDNFP23560 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.43□□□□□ -1.38
BDNFP23560 AC108673.3-201ENST00000609183 335 ntBASIC6.43□□□□□ -1.38
BDNFP23560 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BDNFP23560 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
BDNFP23560 AP001885.1-201ENST00000621658 558 ntBASIC6.43□□□□□ -1.38
BDNFP23560 AL136228.1-201ENST00000622221 319 ntBASIC6.43□□□□□ -1.38
BDNFP23560 FO681491.1-202ENST00000623392 737 ntBASIC6.43□□□□□ -1.38
BDNFP23560 AP003499.2-201ENST00000624100 483 ntBASIC6.43□□□□□ -1.38
BDNFP23560 AL357562.1-201ENST00000624911 609 ntBASIC6.43□□□□□ -1.38
BDNFP23560 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.43□□□□□ -1.38
BDNFP23560 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BDNFP23560 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
BDNFP23560 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.43□□□□□ -1.38
BDNFP23560 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BDNFP23560 AC009779.8-201ENST00000641684 4384 ntBASIC6.43□□□□□ -1.38
BDNFP23560 KARSP1-201ENST00000451871 1752 ntBASIC6.43□□□□□ -1.38
BDNFP23560 CCNT2P1-201ENST00000423082 1315 ntBASIC6.43□□□□□ -1.38
BDNFP23560 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.43□□□□□ -1.38
BDNFP23560 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BDNFP23560 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
BDNFP23560 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BDNFP23560 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.43□□□□□ -1.38
BDNFP23560 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
BDNFP23560 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BDNFP23560 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BDNFP23560 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.42□□□□□ -1.38
BDNFP23560 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
BDNFP23560 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BDNFP23560 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BDNFP23560 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.42□□□□□ -1.38
BDNFP23560 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.42□□□□□ -1.38
BDNFP23560 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.42□□□□□ -1.38
BDNFP23560 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.42□□□□□ -1.38
BDNFP23560 AL161756.3-201ENST00000641216 2071 ntBASIC6.42□□□□□ -1.38
BDNFP23560 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.42□□□□□ -1.38
BDNFP23560 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
BDNFP23560 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BDNFP23560 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
BDNFP23560 RNA5SP273-201ENST00000362484 113 ntBASIC6.42□□□□□ -1.38
BDNFP23560 SUGT1P2-201ENST00000379452 992 ntBASIC6.42□□□□□ -1.38
BDNFP23560 LYPLA1P3-201ENST00000402650 695 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AL096711.1-201ENST00000404780 554 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AL353626.3-201ENST00000413399 657 ntBASIC6.42□□□□□ -1.38
BDNFP23560 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AC017019.1-201ENST00000426129 261 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AC016027.4-201ENST00000450866 277 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.42□□□□□ -1.38
BDNFP23560 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.42□□□□□ -1.38
BDNFP23560 HLA-DPA3-207ENST00000454398 229 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AC112187.1-201ENST00000455837 479 ntBASIC6.42□□□□□ -1.38
BDNFP23560 SNRPCP3-201ENST00000474888 476 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.42□□□□□ -1.38
BDNFP23560 AC093815.1-201ENST00000508637 280 ntBASIC6.42□□□□□ -1.38
BDNFP23560 IMPA1P1-201ENST00000510718 842 ntBASIC6.42□□□□□ -1.38
BDNFP23560 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.42□□□□□ -1.38
BDNFP23560 NANOGNBP2-201ENST00000544753 553 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.42□□□□□ -1.38
BDNFP23560 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.42□□□□□ -1.38
BDNFP23560 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.42□□□□□ -1.38
BDNFP23560 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.42□□□□□ -1.38
BDNFP23560 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.42□□□□□ -1.38
BDNFP23560 AC245128.3-201ENST00000594721 748 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AC016911.1-201ENST00000613297 452 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AL096712.1-201ENST00000614561 159 ntBASIC6.42□□□□□ -1.38
BDNFP23560 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.42□□□□□ -1.38
BDNFP23560 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BDNFP23560 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.42□□□□□ -1.38
BDNFP23560 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
BDNFP23560 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
BDNFP23560 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BDNFP23560 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.42□□□□□ -1.38
BDNFP23560 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.42□□□□□ -1.38
BDNFP23560 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.42□□□□□ -1.38
BDNFP23560 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BDNFP23560 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.41□□□□□ -1.38
BDNFP23560 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.41□□□□□ -1.38
BDNFP23560 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BDNFP23560 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BDNFP23560 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
BDNFP23560 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BDNFP23560 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.41□□□□□ -1.38
BDNFP23560 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
BDNFP23560 TMSB4XP2-201ENST00000335179 210 ntBASIC6.41□□□□□ -1.38
BDNFP23560 SNORD8-201ENST00000363915 110 ntBASIC6.41□□□□□ -1.38
BDNFP23560 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BDNFP23560 AL034374.1-201ENST00000406329 351 ntBASIC6.41□□□□□ -1.38
BDNFP23560 RPS26P13-201ENST00000419030 330 ntBASIC6.41□□□□□ -1.38
BDNFP23560 AC007568.1-201ENST00000422912 471 ntBASIC6.41□□□□□ -1.38
BDNFP23560 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.41□□□□□ -1.38
BDNFP23560 AL606490.7-201ENST00000433136 191 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms