Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL445670.1-201ENST00000618889 801 ntBASIC4.54□□□□□ -1.68
CD28P10747 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.54□□□□□ -1.68
CD28P10747 U1.31-201ENST00000620022 160 ntBASIC4.54□□□□□ -1.68
CD28P10747 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.54□□□□□ -1.68
CD28P10747 AC022919.1-201ENST00000624979 626 ntBASIC4.54□□□□□ -1.68
CD28P10747 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD28P10747 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.54□□□□□ -1.68
CD28P10747 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD28P10747 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CD28P10747 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD28P10747 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.54□□□□□ -1.68
CD28P10747 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD28P10747 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.54□□□□□ -1.68
CD28P10747 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD28P10747 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.53□□□□□ -1.68
CD28P10747 AC006600.2-201ENST00000624834 2506 ntBASIC4.53□□□□□ -1.68
CD28P10747 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD28P10747 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.53□□□□□ -1.68
CD28P10747 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CD28P10747 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC4.53□□□□□ -1.68
CD28P10747 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC4.53□□□□□ -1.68
CD28P10747 AL031595.2-201ENST00000624215 19071 ntBASIC4.53□□□□□ -1.68
CD28P10747 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD28P10747 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CD28P10747 RNA5SP132-201ENST00000364725 118 ntBASIC4.53□□□□□ -1.68
CD28P10747 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CD28P10747 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CD28P10747 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CD28P10747 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CD28P10747 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.53□□□□□ -1.68
CD28P10747 AC016769.2-201ENST00000414815 475 ntBASIC4.53□□□□□ -1.68
CD28P10747 Z93019.1-201ENST00000416450 973 ntBASIC4.53□□□□□ -1.68
CD28P10747 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.53□□□□□ -1.68
CD28P10747 TNPO1P1-201ENST00000423641 1138 ntBASIC4.53□□□□□ -1.68
CD28P10747 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.53□□□□□ -1.68
CD28P10747 AL022331.1-201ENST00000429025 477 ntBASIC4.53□□□□□ -1.68
CD28P10747 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.53□□□□□ -1.68
CD28P10747 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.53□□□□□ -1.68
CD28P10747 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.53□□□□□ -1.68
CD28P10747 AL157777.1-201ENST00000468100 304 ntBASIC4.53□□□□□ -1.68
CD28P10747 SIAH1P1-201ENST00000479411 923 ntBASIC4.53□□□□□ -1.68
CD28P10747 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.53□□□□□ -1.68
CD28P10747 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.53□□□□□ -1.68
CD28P10747 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.53□□□□□ -1.68
CD28P10747 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.53□□□□□ -1.68
CD28P10747 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.53□□□□□ -1.68
CD28P10747 AC027026.1-201ENST00000532323 742 ntBASIC4.53□□□□□ -1.68
CD28P10747 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.53□□□□□ -1.68
CD28P10747 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.53□□□□□ -1.68
CD28P10747 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.53□□□□□ -1.68
CD28P10747 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.53□□□□□ -1.68
CD28P10747 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.53□□□□□ -1.68
CD28P10747 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.53□□□□□ -1.68
CD28P10747 AL390318.1-201ENST00000624564 687 ntBASIC4.53□□□□□ -1.68
CD28P10747 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CD28P10747 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD28P10747 Z83820.1-201ENST00000456978 1499 ntBASIC4.53□□□□□ -1.68
CD28P10747 AL121768.1-201ENST00000613917 2544 ntBASIC4.53□□□□□ -1.68
CD28P10747 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD28P10747 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD28P10747 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.53□□□□□ -1.68
CD28P10747 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.53□□□□□ -1.68
CD28P10747 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CD28P10747 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD28P10747 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD28P10747 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD28P10747 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CD28P10747 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CD28P10747 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD28P10747 GVINP1-202ENST00000531871 7271 ntBASIC4.52□□□□□ -1.69
CD28P10747 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD28P10747 AC139426.3-201ENST00000605648 2059 ntBASIC4.52□□□□□ -1.69
CD28P10747 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD28P10747 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.52□□□□□ -1.69
CD28P10747 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.52□□□□□ -1.69
CD28P10747 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.52□□□□□ -1.69
CD28P10747 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.52□□□□□ -1.69
CD28P10747 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.52□□□□□ -1.69
CD28P10747 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.52□□□□□ -1.69
CD28P10747 AL357752.1-201ENST00000412817 349 ntBASIC4.52□□□□□ -1.69
CD28P10747 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD28P10747 BMS1P17-202ENST00000416720 316 ntBASIC4.52□□□□□ -1.69
CD28P10747 BMS1P13-201ENST00000417301 885 ntBASIC4.52□□□□□ -1.69
CD28P10747 AL355433.1-201ENST00000422804 300 ntBASIC4.52□□□□□ -1.69
CD28P10747 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.52□□□□□ -1.69
CD28P10747 FMO7P-201ENST00000436045 768 ntBASIC4.52□□□□□ -1.69
CD28P10747 AC005297.1-201ENST00000444765 862 ntBASIC4.52□□□□□ -1.69
CD28P10747 AL162739.1-201ENST00000450606 307 ntBASIC4.52□□□□□ -1.69
CD28P10747 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.52□□□□□ -1.69
CD28P10747 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.52□□□□□ -1.69
CD28P10747 RPS17P15-201ENST00000475609 349 ntBASIC4.52□□□□□ -1.69
CD28P10747 RPL32P33-201ENST00000487023 394 ntBASIC4.52□□□□□ -1.69
CD28P10747 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.52□□□□□ -1.69
CD28P10747 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.52□□□□□ -1.69
CD28P10747 RN7SKP288-201ENST00000516227 268 ntBASIC4.52□□□□□ -1.69
CD28P10747 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.52□□□□□ -1.69
CD28P10747 IGLV2-28-201ENST00000520681 304 ntBASIC4.52□□□□□ -1.69
CD28P10747 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.52□□□□□ -1.69
CD28P10747 IGKV2-18-201ENST00000522607 343 ntBASIC4.52□□□□□ -1.69
CD28P10747 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms