Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.4□□□□□ -1.38
MMP3P08254 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.4□□□□□ -1.38
MMP3P08254 HSPE1P2-201ENST00000554777 306 ntBASIC6.4□□□□□ -1.38
MMP3P08254 TMF1P1-201ENST00000576058 373 ntBASIC6.4□□□□□ -1.38
MMP3P08254 AP000919.1-201ENST00000582850 985 ntBASIC6.4□□□□□ -1.38
MMP3P08254 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.4□□□□□ -1.38
MMP3P08254 FKBP1AP1-201ENST00000594588 318 ntBASIC6.4□□□□□ -1.38
MMP3P08254 AC138473.1-201ENST00000605717 526 ntBASIC6.4□□□□□ -1.38
MMP3P08254 BX322635.1-201ENST00000605804 496 ntBASIC6.4□□□□□ -1.38
MMP3P08254 AL133445.2-201ENST00000611191 527 ntBASIC6.4□□□□□ -1.38
MMP3P08254 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
MMP3P08254 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MMP3P08254 AC005840.5-201ENST00000619166 599 ntBASIC6.4□□□□□ -1.38
MMP3P08254 AC021766.1-201ENST00000624404 741 ntBASIC6.4□□□□□ -1.38
MMP3P08254 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.4□□□□□ -1.38
MMP3P08254 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.4□□□□□ -1.38
MMP3P08254 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.4□□□□□ -1.38
MMP3P08254 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.4□□□□□ -1.39
MMP3P08254 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
MMP3P08254 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
MMP3P08254 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
MMP3P08254 AC025470.1-201ENST00000510053 2032 ntBASIC6.4□□□□□ -1.39
MMP3P08254 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
MMP3P08254 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
MMP3P08254 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.39□□□□□ -1.39
MMP3P08254 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.39□□□□□ -1.39
MMP3P08254 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
MMP3P08254 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.39□□□□□ -1.39
MMP3P08254 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.39□□□□□ -1.39
MMP3P08254 GAPDHP42-201ENST00000406848 981 ntBASIC6.39□□□□□ -1.39
MMP3P08254 USP9YP19-201ENST00000412165 485 ntBASIC6.39□□□□□ -1.39
MMP3P08254 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
MMP3P08254 AL450023.1-201ENST00000450868 751 ntBASIC6.39□□□□□ -1.39
MMP3P08254 MTND3P4-201ENST00000453537 303 ntBASIC6.39□□□□□ -1.39
MMP3P08254 SBDSP1-204ENST00000453858 737 ntBASIC6.39□□□□□ -1.39
MMP3P08254 RN7SL583P-201ENST00000475692 287 ntBASIC6.39□□□□□ -1.39
MMP3P08254 EIF1P7-201ENST00000487533 337 ntBASIC6.39□□□□□ -1.39
MMP3P08254 RWDD4P1-201ENST00000488019 565 ntBASIC6.39□□□□□ -1.39
MMP3P08254 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.39□□□□□ -1.39
MMP3P08254 AC090424.1-201ENST00000535243 736 ntBASIC6.39□□□□□ -1.39
MMP3P08254 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.39□□□□□ -1.39
MMP3P08254 AL049779.3-201ENST00000557141 606 ntBASIC6.39□□□□□ -1.39
MMP3P08254 AC067805.1-201ENST00000559344 470 ntBASIC6.39□□□□□ -1.39
MMP3P08254 MRPS21P7-201ENST00000566937 238 ntBASIC6.39□□□□□ -1.39
MMP3P08254 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.39□□□□□ -1.39
MMP3P08254 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.39□□□□□ -1.39
MMP3P08254 BNIP3P32-201ENST00000600015 554 ntBASIC6.39□□□□□ -1.39
MMP3P08254 AC005229.3-201ENST00000603438 323 ntBASIC6.39□□□□□ -1.39
MMP3P08254 SUGT1P3-202ENST00000604259 383 ntBASIC6.39□□□□□ -1.39
MMP3P08254 PPATP2-201ENST00000605635 508 ntBASIC6.39□□□□□ -1.39
MMP3P08254 AC010245.2-201ENST00000606908 1167 ntBASIC6.39□□□□□ -1.39
MMP3P08254 MIR6730-201ENST00000622213 67 ntBASIC6.39□□□□□ -1.39
MMP3P08254 AC117409.1-201ENST00000470499 1310 ntBASIC6.39□□□□□ -1.39
MMP3P08254 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.39□□□□□ -1.39
MMP3P08254 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 AL590763.1-201ENST00000398297 1545 ntBASIC6.39□□□□□ -1.39
MMP3P08254 OLMALINC-203ENST00000641087 3779 ntBASIC6.39□□□□□ -1.39
MMP3P08254 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
MMP3P08254 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
MMP3P08254 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MMP3P08254 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.38□□□□□ -1.39
MMP3P08254 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.38□□□□□ -1.39
MMP3P08254 AC009779.8-201ENST00000641684 4384 ntBASIC6.38□□□□□ -1.39
MMP3P08254 AL589826.1-201ENST00000340697 249 ntBASIC6.38□□□□□ -1.39
MMP3P08254 SNORA74A-201ENST00000364089 198 ntBASIC6.38□□□□□ -1.39
MMP3P08254 SNORA58B-201ENST00000364259 136 ntBASIC6.38□□□□□ -1.39
MMP3P08254 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
MMP3P08254 MIR1286-201ENST00000408112 78 ntBASIC6.38□□□□□ -1.39
MMP3P08254 GABARAPL3-201ENST00000412799 354 ntBASIC6.38□□□□□ -1.39
MMP3P08254 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.38□□□□□ -1.39
MMP3P08254 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.38□□□□□ -1.39
MMP3P08254 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.38□□□□□ -1.39
MMP3P08254 OR7E116P-201ENST00000448529 957 ntBASIC6.38□□□□□ -1.39
MMP3P08254 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.38□□□□□ -1.39
MMP3P08254 AP000547.1-201ENST00000454360 617 ntBASIC6.38□□□□□ -1.39
MMP3P08254 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MMP3P08254 AP001960.1-201ENST00000506494 658 ntBASIC6.38□□□□□ -1.39
MMP3P08254 AC105384.2-201ENST00000508433 640 ntBASIC6.38□□□□□ -1.39
MMP3P08254 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.38□□□□□ -1.39
MMP3P08254 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.38□□□□□ -1.39
MMP3P08254 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.38□□□□□ -1.39
MMP3P08254 AC007346.2-201ENST00000564816 892 ntBASIC6.38□□□□□ -1.39
MMP3P08254 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.38□□□□□ -1.39
MMP3P08254 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.38□□□□□ -1.39
MMP3P08254 GMCL1P2-201ENST00000605230 823 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms