Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RN7SKP184-201ENST00000362348 333 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 U3.28-201ENST00000391249 210 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.37□□□□□ -1.55
MT-ND1P03886 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.37□□□□□ -1.55
MT-ND1P03886 AC009784.1-201ENST00000426484 460 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 AC108479.1-201ENST00000431142 427 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 RPSAP32-201ENST00000432681 526 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 RPL5P25-201ENST00000441148 775 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 RN7SL254P-201ENST00000460609 284 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 AC023245.1-201ENST00000468501 517 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 AC091544.1-201ENST00000484702 348 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 RPS7P6-201ENST00000485777 579 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 RPL29P23-201ENST00000486188 442 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.37□□□□□ -1.55
MT-ND1P03886 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 RNA5SP441-201ENST00000516809 88 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.37□□□□□ -1.55
MT-ND1P03886 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.37□□□□□ -1.55
MT-ND1P03886 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.37□□□□□ -1.55
MT-ND1P03886 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.37□□□□□ -1.55
MT-ND1P03886 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.37□□□□□ -1.55
MT-ND1P03886 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.37□□□□□ -1.55
MT-ND1P03886 AP005901.4-201ENST00000577336 569 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 AC016839.1-201ENST00000578162 867 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.37□□□□□ -1.55
MT-ND1P03886 AC018809.2-201ENST00000602436 3823 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 AC002069.2-201ENST00000603580 883 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
MT-ND1P03886 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.37□□□□□ -1.55
MT-ND1P03886 AC073488.3-201ENST00000631611 778 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 AC073488.6-201ENST00000632293 754 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 AL357140.4-201ENST00000636827 412 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.37□□□□□ -1.55
MT-ND1P03886 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
MT-ND1P03886 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
MT-ND1P03886 CAP1P2-201ENST00000417455 1409 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 RBPJP7-201ENST00000442803 1447 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 RBPJP5-201ENST00000449433 1447 ntBASIC5.37□□□□□ -1.55
MT-ND1P03886 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.37□□□□□ -1.55
MT-ND1P03886 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MT-ND1P03886 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.37□□□□□ -1.55
MT-ND1P03886 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.37□□□□□ -1.55
MT-ND1P03886 OR9K1P-202ENST00000641111 3217 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 AC012254.3-201ENST00000591183 2117 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MT-ND1P03886 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
MT-ND1P03886 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.36□□□□□ -1.55
MT-ND1P03886 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
MT-ND1P03886 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
MT-ND1P03886 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MT-ND1P03886 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
MT-ND1P03886 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.36□□□□□ -1.55
MT-ND1P03886 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MT-ND1P03886 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
MT-ND1P03886 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.36□□□□□ -1.55
MT-ND1P03886 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
MT-ND1P03886 YWHAZP6-201ENST00000399764 738 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 RNGTTP1-201ENST00000420965 728 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 OR10T1P-201ENST00000424327 947 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AC023141.3-201ENST00000436698 278 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 AL445466.1-201ENST00000448432 357 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 HMGB1P7-201ENST00000450921 612 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 MEMO1P4-201ENST00000453590 386 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 AC092865.4-201ENST00000477936 615 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 DEFB109A-201ENST00000482450 265 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 NPM1P28-201ENST00000492269 840 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 LDHAP1-201ENST00000509421 992 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 RNU4-18P-201ENST00000516751 149 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 AC116917.1-201ENST00000520558 305 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MT-ND1P03886 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 TRAV11-201ENST00000539512 339 ntBASIC5.36□□□□□ -1.55
MT-ND1P03886 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.36□□□□□ -1.55
MT-ND1P03886 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.36□□□□□ -1.55
MT-ND1P03886 AC007346.1-201ENST00000569208 867 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms