Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 SNRPGP1-201ENST00000553864 222 ntBASIC5.77□□□□□ -1.49
LDLRP01130 TPRX1P1-201ENST00000557620 319 ntBASIC5.77□□□□□ -1.49
LDLRP01130 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.77□□□□□ -1.49
LDLRP01130 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 AC020978.7-201ENST00000575953 1187 ntBASIC5.77□□□□□ -1.49
LDLRP01130 RNA5SP439-201ENST00000617595 124 ntBASIC5.77□□□□□ -1.49
LDLRP01130 AC006213.5-201ENST00000619673 288 ntBASIC5.77□□□□□ -1.49
LDLRP01130 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.77□□□□□ -1.49
LDLRP01130 LINC02495-203ENST00000636704 242 ntBASIC5.77□□□□□ -1.49
LDLRP01130 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.77□□□□□ -1.49
LDLRP01130 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 AL354854.1-201ENST00000455940 1363 ntBASIC5.77□□□□□ -1.49
LDLRP01130 CASC19-255ENST00000641733 1385 ntBASIC5.77□□□□□ -1.49
LDLRP01130 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.76□□□□□ -1.49
LDLRP01130 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LDLRP01130 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LDLRP01130 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.76□□□□□ -1.49
LDLRP01130 AC053481.2-202ENST00000582394 1500 ntBASIC5.76□□□□□ -1.49
LDLRP01130 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 RNA5SP242-201ENST00000364171 118 ntBASIC5.76□□□□□ -1.49
LDLRP01130 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 FAM204CP-201ENST00000424489 642 ntBASIC5.76□□□□□ -1.49
LDLRP01130 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 ATP5LP2-201ENST00000440646 311 ntBASIC5.76□□□□□ -1.49
LDLRP01130 BTBD7P2-201ENST00000441962 620 ntBASIC5.76□□□□□ -1.49
LDLRP01130 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 MORF4-201ENST00000447135 971 ntBASIC5.76□□□□□ -1.49
LDLRP01130 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.76□□□□□ -1.49
LDLRP01130 AL162739.1-201ENST00000450606 307 ntBASIC5.76□□□□□ -1.49
LDLRP01130 MTND3P4-201ENST00000453537 303 ntBASIC5.76□□□□□ -1.49
LDLRP01130 AC108751.3-201ENST00000461814 1020 ntBASIC5.76□□□□□ -1.49
LDLRP01130 AC026348.1-201ENST00000462549 1053 ntBASIC5.76□□□□□ -1.49
LDLRP01130 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.76□□□□□ -1.49
LDLRP01130 RNA5SP206-201ENST00000516703 121 ntBASIC5.76□□□□□ -1.49
LDLRP01130 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 AC027544.3-201ENST00000535082 757 ntBASIC5.76□□□□□ -1.49
LDLRP01130 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.76□□□□□ -1.49
LDLRP01130 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.76□□□□□ -1.49
LDLRP01130 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.76□□□□□ -1.49
LDLRP01130 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.76□□□□□ -1.49
LDLRP01130 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 AC012467.1-201ENST00000607740 256 ntBASIC5.76□□□□□ -1.49
LDLRP01130 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.76□□□□□ -1.49
LDLRP01130 AC004801.6-201ENST00000616571 978 ntBASIC5.76□□□□□ -1.49
LDLRP01130 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
LDLRP01130 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 AC004076.2-201ENST00000620532 3323 ntBASIC5.76□□□□□ -1.49
LDLRP01130 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.76□□□□□ -1.49
LDLRP01130 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
LDLRP01130 GTF2IP4-201ENST00000453092 2054 ntBASIC5.76□□□□□ -1.49
LDLRP01130 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.76□□□□□ -1.49
LDLRP01130 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
LDLRP01130 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
LDLRP01130 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.76□□□□□ -1.49
LDLRP01130 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
LDLRP01130 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
LDLRP01130 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
LDLRP01130 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
LDLRP01130 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.75□□□□□ -1.49
LDLRP01130 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 OR5T3-201ENST00000303059 1023 ntBASIC5.75□□□□□ -1.49
LDLRP01130 RN7SKP128-201ENST00000364270 303 ntBASIC5.75□□□□□ -1.49
LDLRP01130 U3.10-201ENST00000364459 214 ntBASIC5.75□□□□□ -1.49
LDLRP01130 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.75□□□□□ -1.49
LDLRP01130 MIR130B-202ENST00000385018 82 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms