Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 WDR95P-201ENST00000425638 1542 ntBASIC6.14□□□□□ -1.43
MSI1O43347 THAP12P9-201ENST00000503971 2360 ntBASIC6.14□□□□□ -1.43
MSI1O43347 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MSI1O43347 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
MSI1O43347 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
MSI1O43347 THAP12P8-201ENST00000447914 2115 ntBASIC6.13□□□□□ -1.43
MSI1O43347 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 AP002833.3-201ENST00000625075 2265 ntBASIC6.13□□□□□ -1.43
MSI1O43347 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 AL139039.2-201ENST00000407436 479 ntBASIC6.13□□□□□ -1.43
MSI1O43347 AC245060.4-201ENST00000413293 1121 ntBASIC6.13□□□□□ -1.43
MSI1O43347 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 AL357078.2-201ENST00000416486 427 ntBASIC6.13□□□□□ -1.43
MSI1O43347 AL035660.1-201ENST00000422041 222 ntBASIC6.13□□□□□ -1.43
MSI1O43347 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.13□□□□□ -1.43
MSI1O43347 AL389925.1-201ENST00000432257 728 ntBASIC6.13□□□□□ -1.43
MSI1O43347 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.13□□□□□ -1.43
MSI1O43347 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.13□□□□□ -1.43
MSI1O43347 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.13□□□□□ -1.43
MSI1O43347 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.13□□□□□ -1.43
MSI1O43347 REG1CP-206ENST00000447469 496 ntBASIC6.13□□□□□ -1.43
MSI1O43347 AP006222.1-205ENST00000450734 457 ntBASIC6.13□□□□□ -1.43
MSI1O43347 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.13□□□□□ -1.43
MSI1O43347 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.13□□□□□ -1.43
MSI1O43347 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.13□□□□□ -1.43
MSI1O43347 AC011476.1-201ENST00000466725 307 ntBASIC6.13□□□□□ -1.43
MSI1O43347 PFN1P6-201ENST00000476786 399 ntBASIC6.13□□□□□ -1.43
MSI1O43347 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.13□□□□□ -1.43
MSI1O43347 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.13□□□□□ -1.43
MSI1O43347 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.13□□□□□ -1.43
MSI1O43347 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.13□□□□□ -1.43
MSI1O43347 AC025423.2-201ENST00000537570 439 ntBASIC6.13□□□□□ -1.43
MSI1O43347 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.13□□□□□ -1.43
MSI1O43347 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.13□□□□□ -1.43
MSI1O43347 ZNF322P1-201ENST00000568013 1209 ntBASIC6.13□□□□□ -1.43
MSI1O43347 AC008521.2-201ENST00000591021 259 ntBASIC6.13□□□□□ -1.43
MSI1O43347 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 FAM27E4-201ENST00000605259 342 ntBASIC6.13□□□□□ -1.43
MSI1O43347 AC021766.1-201ENST00000624404 741 ntBASIC6.13□□□□□ -1.43
MSI1O43347 AL590396.2-201ENST00000636511 1041 ntBASIC6.13□□□□□ -1.43
MSI1O43347 AC106858.1-201ENST00000637497 429 ntBASIC6.13□□□□□ -1.43
MSI1O43347 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 NEPNP-201ENST00000404786 1371 ntBASIC6.13□□□□□ -1.43
MSI1O43347 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
MSI1O43347 AC015799.1-201ENST00000622996 3122 ntBASIC6.13□□□□□ -1.43
MSI1O43347 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.13□□□□□ -1.43
MSI1O43347 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
MSI1O43347 OR4G1P-202ENST00000641173 1788 ntBASIC6.13□□□□□ -1.43
MSI1O43347 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
MSI1O43347 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.13□□□□□ -1.43
MSI1O43347 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSI1O43347 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MSI1O43347 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MSI1O43347 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSI1O43347 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MSI1O43347 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSI1O43347 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
MSI1O43347 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
MSI1O43347 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
MSI1O43347 AC023490.2-201ENST00000359859 470 ntBASIC6.12□□□□□ -1.43
MSI1O43347 RNU6-386P-201ENST00000362650 107 ntBASIC6.12□□□□□ -1.43
MSI1O43347 Y_RNA.62-201ENST00000362840 99 ntBASIC6.12□□□□□ -1.43
MSI1O43347 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.12□□□□□ -1.43
MSI1O43347 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
MSI1O43347 RN7SKP29-201ENST00000410957 272 ntBASIC6.12□□□□□ -1.43
MSI1O43347 MRPL53P1-201ENST00000414323 319 ntBASIC6.12□□□□□ -1.43
MSI1O43347 PDZK1P1-202ENST00000425209 1350 ntBASIC6.12□□□□□ -1.43
MSI1O43347 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.12□□□□□ -1.43
MSI1O43347 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.12□□□□□ -1.43
MSI1O43347 MSL3P1-202ENST00000440028 1468 ntBASIC6.12□□□□□ -1.43
MSI1O43347 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.12□□□□□ -1.43
MSI1O43347 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.12□□□□□ -1.43
MSI1O43347 RPL31P53-201ENST00000457065 348 ntBASIC6.12□□□□□ -1.43
MSI1O43347 AL603882.1-201ENST00000463059 681 ntBASIC6.12□□□□□ -1.43
MSI1O43347 AL355032.1-201ENST00000472981 438 ntBASIC6.12□□□□□ -1.43
MSI1O43347 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.12□□□□□ -1.43
MSI1O43347 DEFB109A-201ENST00000482450 265 ntBASIC6.12□□□□□ -1.43
MSI1O43347 CR383656.1-201ENST00000484916 377 ntBASIC6.12□□□□□ -1.43
MSI1O43347 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.12□□□□□ -1.43
MSI1O43347 PSMA2P2-201ENST00000504319 686 ntBASIC6.12□□□□□ -1.43
MSI1O43347 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MSI1O43347 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.12□□□□□ -1.43
MSI1O43347 SNORD46.2-201ENST00000516021 102 ntBASIC6.12□□□□□ -1.43
MSI1O43347 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.12□□□□□ -1.43
MSI1O43347 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.12□□□□□ -1.43
MSI1O43347 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.12□□□□□ -1.43
MSI1O43347 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.12□□□□□ -1.43
MSI1O43347 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.12□□□□□ -1.43
MSI1O43347 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.12□□□□□ -1.43
MSI1O43347 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.12□□□□□ -1.43
MSI1O43347 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.12□□□□□ -1.43
MSI1O43347 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MSI1O43347 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms