Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC188H7C350 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC188H7C350 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC188H7C350 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
CCDC188H7C350 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC188H7C350 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CCDC188H7C350 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC188H7C350 AC079097.1-201ENST00000512187 1399 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC188H7C350 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC188H7C350 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC188H7C350 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC188H7C350 RNA5SP326-201ENST00000363209 110 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 RNU6-1331P-201ENST00000363658 106 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC188H7C350 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC188H7C350 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC188H7C350 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 VN1R31P-201ENST00000417498 730 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC188H7C350 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC188H7C350 PSMD8P1-201ENST00000436275 769 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 RPEP4-201ENST00000437636 602 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 RPS10P18-201ENST00000442662 495 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC188H7C350 RPS7P10-201ENST00000464254 603 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC188H7C350 SUMO2P4-201ENST00000504193 276 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 HMGN1P16-201ENST00000508308 283 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 MAST4-IT1-201ENST00000514241 658 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC188H7C350 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC188H7C350 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC188H7C350 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC188H7C350 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCDC188H7C350 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC188H7C350 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC188H7C350 AC010503.3-201ENST00000594355 540 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCDC188H7C350 AC012368.3-201ENST00000604190 219 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 QTRT1P1-201ENST00000604344 1078 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 AL136131.3-201ENST00000607600 188 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC188H7C350 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC188H7C350 PARP4P2-201ENST00000446672 3326 ntBASIC5.94□□□□□ -1.46
CCDC188H7C350 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC188H7C350 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC188H7C350 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
CCDC188H7C350 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC188H7C350 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC188H7C350 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC188H7C350 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC188H7C350 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC188H7C350 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC188H7C350 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC188H7C350 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC188H7C350 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC188H7C350 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC188H7C350 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC188H7C350 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC188H7C350 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC188H7C350 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AL133260.1-201ENST00000405720 405 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC188H7C350 RPL7AP51-201ENST00000422016 760 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC188H7C350 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC023141.3-201ENST00000436698 278 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC092601.1-201ENST00000444526 383 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AC010240.2-201ENST00000445363 1205 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC188H7C350 GEMIN2P1-201ENST00000454246 752 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 RN7SL188P-201ENST00000469842 285 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 RPS4XP17-201ENST00000479057 754 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 RNA5SP230-201ENST00000517039 122 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC011270.1-201ENST00000558606 583 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC188H7C350 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AGGF1P7-201ENST00000562369 913 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC188H7C350 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC188H7C350 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC068768.2-201ENST00000602352 343 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AC002069.2-201ENST00000603580 883 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AC073333.2-201ENST00000603589 769 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms