Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5538W4VSP6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5538W4VSP6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5538W4VSP6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5538W4VSP6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5538W4VSP6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5538W4VSP6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Gm10566-201ENSMUST00000086739 996 ntBASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm5538W4VSP6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm5538W4VSP6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5538W4VSP6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5538W4VSP6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5538W4VSP6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5538W4VSP6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5538W4VSP6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5538W4VSP6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5538W4VSP6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.2■□□□□ 0.34
Gm5538W4VSP6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5538W4VSP6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5538W4VSP6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms