Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Gm37292-201ENSMUST00000192062 758 ntBASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
H2afb3S4R1G7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
H2afb3S4R1G7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb3S4R1G7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Gm10517-202ENSMUST00000192970 758 ntBASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Trmt13-210ENSMUST00000198454 880 ntBASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb3S4R1G7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms