Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Smc1aQ9CU62 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.9■□□□□ 0.62
Smc1aQ9CU62 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.9■□□□□ 0.62
Smc1aQ9CU62 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smc1aQ9CU62 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1aQ9CU62 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1aQ9CU62 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smc1aQ9CU62 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Smc1aQ9CU62 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smc1aQ9CU62 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smc1aQ9CU62 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Gm6659-201ENSMUST00000174752 547 ntBASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Tgds-204ENSMUST00000228543 1594 ntBASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.89■□□□□ 0.61
Smc1aQ9CU62 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1aQ9CU62 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1aQ9CU62 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1aQ9CU62 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smc1aQ9CU62 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1aQ9CU62 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1aQ9CU62 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.84■□□□□ 0.61
Smc1aQ9CU62 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1aQ9CU62 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms