Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cttnbp2nlQ99LJ0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cttnbp2nlQ99LJ0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cttnbp2nlQ99LJ0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cttnbp2nlQ99LJ0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cttnbp2nlQ99LJ0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cttnbp2nlQ99LJ0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.13■□□□□ 0.33
Cttnbp2nlQ99LJ0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Mtag2-201ENSMUST00000058665 714 ntBASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cttnbp2nlQ99LJ0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gm11927-201ENSMUST00000118472 759 ntBASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gm26571-201ENSMUST00000181399 666 ntBASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cttnbp2nlQ99LJ0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cttnbp2nlQ99LJ0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms